| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4601 |
|---|
| Symbol | |
|---|
| ID | 5902063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 4974851 |
|---|
| End bp | 4976134 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641565120 |
|---|
| Product | beta-lactamase |
|---|
| Protein accession | YP_001686219 |
|---|
| Protein GI | 167648556 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.850083 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.239148 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGTG ATGTCCTTCG CCGCGCTCTC GGCTTCGATC CCGAAAAGCT CGCCGCGGTG
GGGCCTGCTC TCCAGGCCTT CGTCGATCGT GGCGAGCTCG CGGGCGTCGT GACCCTCACC
TCGCGGCGCG GCGAGATCGT CCAGGCCGAG GCGGTCGGCT GGCGTGACAT CGACACGGGC
GCGCCGATGC TGCCGGACAC CCTGTTCCGC ATCGCCTCGA TGACCAAACC GATCACATCG
GTGGCGGCCT TGATGCTCGT CGAGGAGGGC AGGATCGCTC TGACCGACCC GATCTCGCGC
TGGGTTCCGG AACTGGCCAA TCCGCTCGTG TTACGCGACG CCGCGGGACC CTTGCGCGAC
ACGGTCCCCG CGGGACGGGC GATCACCATC GAGGATCTGC TCACCCACCG CTCGGGCGTC
GCCTATGGCT TTTCCTCGGA AGGACCGCTC CAGCACGCCT ATGAGCGCGC GCTCGGCGAT
CCGGCGATGA ACCGCCTGAC GCCCGACCAG TGGCTGGCCG CGCTCGGCGG CCTGCCGCTC
GCCCACCAAC CCGGCGAACG GTTTCACTAC GGCCATTCGA CGGACGTCCT GGGTTTTCTG
ATCGGTCGGG TCGAAGGCAA GCCGCTGCGC CAGGTGCTGC GGGAGCGGAT CTTCGCGCCG
CTTGGCATGA GCGACACGGA CTTCTGGCTT CCGCACGCGA AGCGAAGCCG TCTTGCGAGC
CTCTATGGAT ACGATGAGAC CGCCAGCAAG CTCGTCAGGG TCGAACCCGA GATGTACGAC
GAGCCGCCGG CCTATACGCC GGGCGGCGGC GGCCTGATCT CGTCGGCGGG GGACTACCAT
CGGTTCGCGC GCATGCTCTT GGGGGAGGGC TCCCTGGACG GGGTGCGCCT GCTGCGGCCC
GAGACCGTCC GGCTGATGCG GACCAACCGG TTGACCGAAG CCCAGCGCCA GATTCCGTTC
GCGGGCATGC CGCTTTGGCA AACGAACGGT TTTGGGCTGG GGCTCTCGAT CGCCGAGGGC
CTGGTCGAAA ACCCCTATGC TTGCGGCGCC TCTGGCGCGA TGACCTGGCC GGGGATCTTC
GGCACATGGT GGCAGGCCGA CCCCATCCAC GATCTGGTCA TGATCTACCT GGTCCAACAC
CAGGTGCCGG TGACCGCGCA CTCGGGGGCG ACGATCGCCA CGGGACGCGG CGCCGCCGGT
CGGCGCGCCC TGCCCGTCTA CCAAAACGGT GTCTATGCCG CCCTGCAAGA CAAGGCCCAA
GGCTCGCAAG CAAGGGATCG ATGA
|
|---|
| Protein sequence | MTSDVLRRAL GFDPEKLAAV GPALQAFVDR GELAGVVTLT SRRGEIVQAE AVGWRDIDTG
APMLPDTLFR IASMTKPITS VAALMLVEEG RIALTDPISR WVPELANPLV LRDAAGPLRD
TVPAGRAITI EDLLTHRSGV AYGFSSEGPL QHAYERALGD PAMNRLTPDQ WLAALGGLPL
AHQPGERFHY GHSTDVLGFL IGRVEGKPLR QVLRERIFAP LGMSDTDFWL PHAKRSRLAS
LYGYDETASK LVRVEPEMYD EPPAYTPGGG GLISSAGDYH RFARMLLGEG SLDGVRLLRP
ETVRLMRTNR LTEAQRQIPF AGMPLWQTNG FGLGLSIAEG LVENPYACGA SGAMTWPGIF
GTWWQADPIH DLVMIYLVQH QVPVTAHSGA TIATGRGAAG RRALPVYQNG VYAALQDKAQ
GSQARDR
|
|---|
| |