| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4562 |
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| Symbol | |
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| ID | 5902023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | + |
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| Start bp | 4939897 |
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| End bp | 4941063 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641565081 |
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| Product | succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001686180 |
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| Protein GI | 167648517 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACCA GCCCCGCTCC CGAACCTGTC AGCATCGACT CCGTCGCCCT CGCCCAGGCC
CTGATCCGCC GTCCGTCCGT GACCCCGGCC GACGAAGGGG CGATGGACGT TCTGCAACGC
CAGCTGGAGG CCCTGGGCTT CAACTGCCGC CGCATGAAGT TCGGCGAGAT CGAGAACCTC
TACGCCCGGC GCGGGACGGA GCGCCCCAAC CTCTGCTTCG CGGGCCACAC CGACGTGGTG
CCGGTCGGCG ACAGCGCAGC TTGGACGCAG GGTCCGTTCG AGGCCGAGAT CCAGGACGGC
ATGCTCTACG GCCGCGGCGC GGTCGACATG AAGAGCGCCA TCGCCGCCTT CGTCGCCGCG
GTTTCAAATC TGCCTCGAGA TCTTCCAGGC TCGCTGAGCT TCCTGATCAC CGGCGACGAG
GAGGGCGTGG CCGAGGACGG CACCGTCCGC GTCGTCCAGG CCCTGGCTGC CGAGGGCGAG
GTCATCGACC ACTGCATCGT CGGCGAACCC ACCAGCGCCA ACCTGCTGGG CGACATGGTC
AAGATCGGCC GGCGCGGCAG CATCAACGCC TGGATCGCCG TGGACGGTCG GCAGGGCCAC
GTGGCCTATC CGCAGCGCGC CGCCAACCCG ATCCCGGTGA TGGTCGACAT CCTCTCGCGC
CTGCAAAGCC GGGTGCTGGA CGAGGGCTAT GAAGGCTTCC AGCCCTCGAA CCTGGAGGTG
ACCACGATCG ACGTCGGCAA CACCGCCACC AACGTCATCC CCGCCTCGGC CAAGGCCCGG
ATCAATATCC GCTTCAACCC CGCCCACCAG GGCAAGGACC TGCGGGCCTG GATTGAACAG
GAGTGCCGCG ACGCCGCCGA TGGCTTTTCC GGCCGGGTCG AGGCCCTGTG CAAGATCGGC
GGCGAGGCCT TTCTGACCCA GCCGGGCGCC TTCACCGACG TGATCGTGGC CGCCGTCGGC
GACGCCACCG GCCGCGTCCC GGAGCTGTCG ACCACCGGCG GCACCAGCGA CGCCCGGTTC
ATCCGCAGCC TGTGCCCGGT GGTCGAGTTC GGCCTGGTCG GCGCCACCAT GCATGCGGTC
GACGAACGCG TGCCGGTGCA GGAAATCCGG GACCTCGCCA ACATCTACCA GGCCCTGATC
GGCCGCTATT TCGCGGCCTT CGCCTGA
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| Protein sequence | MMTSPAPEPV SIDSVALAQA LIRRPSVTPA DEGAMDVLQR QLEALGFNCR RMKFGEIENL
YARRGTERPN LCFAGHTDVV PVGDSAAWTQ GPFEAEIQDG MLYGRGAVDM KSAIAAFVAA
VSNLPRDLPG SLSFLITGDE EGVAEDGTVR VVQALAAEGE VIDHCIVGEP TSANLLGDMV
KIGRRGSINA WIAVDGRQGH VAYPQRAANP IPVMVDILSR LQSRVLDEGY EGFQPSNLEV
TTIDVGNTAT NVIPASAKAR INIRFNPAHQ GKDLRAWIEQ ECRDAADGFS GRVEALCKIG
GEAFLTQPGA FTDVIVAAVG DATGRVPELS TTGGTSDARF IRSLCPVVEF GLVGATMHAV
DERVPVQEIR DLANIYQALI GRYFAAFA
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