Gene Caul_4506 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4506 
Symbol 
ID5901967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4878310 
End bp4879224 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content66% 
IMG OID641565025 
Productcytochrome c oxidase, subunit II 
Protein accessionYP_001686124 
Protein GI167648461 
COG category[C] Energy production and conversion 
COG ID[COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 
TIGRFAM ID[TIGR02866] cytochrome c oxidase, subunit II 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.578189 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGGCGG GCGTAGCCGC CGTCACCGCC ACGACGATGG CTCTTTCGGG CGTGTTCGCG 
GGGCAAGCCC TCGCCAAGGG CGCCGAACTG CTGGGGCAGC CGACACCGGG CGCGATCGAT
CTGCAGCAGG CGGCCTCGCC GCTGAAGCAT CACGCGATCT GGTTCCACAA CATCGTTCTG
ATGCCGATCA TCACGGCCAT CACCTTGCTG GTGCTGGGCC TGCTGGTCTG GATCGTGGTG
CGTTACAACG CCAAATCGAA CCCGGTTCCG GCCAAGTTCA GCCACAACAC CACGGTCGAG
ATCATCTGGA CCATCGTGCC GGTGATCATC CTGATGGTCA TCGCCATCTT CTCGTTCCGG
CTGTTGTTCG ACTACAACAA CATGCCCAAG CCGTACCTGA CGGTGAAGGC CACCGGCTAC
CAGTGGTACT GGGGCTACGA ATATCCCGAC CAGAAGATCA GCGAGATCAC CTCGGTGCCG
CTGAGCAAGG CCGACGCCGA CGCCAAGAAG GTCCCGTACC TGCTGGCCGC CGACAAGCCG
ATGGTGGTGC CGGTCAACCA GGTGATCCGC GTGCAGGTCA CCGGCGCCGA CGTGATCCAC
GCCTTCGCCC TGCCGGCCTT CGGCCTGAAG ACCGACGCCA TCCCGGGCCG CCTGAACGAA
ACCTGGTTCA AGGCCGAGAA GGTGGGCGTC TATTACGGCC AGTGCTCGGA ACTGTGCGGC
GTCGAGCATT CGAACATGCC GATCGAGATC CACGTGGTCA GCCAGCCGGA ATTCGACGCC
TGGGTGAAGT CCAAGACCTC GCCCGCCGCG CCGGCGGCCA CCGCCGCCGC CGCTCCGGCC
GCCGCCACGG TGACCCCGGC CGCGACCGCC CCCGCTTCCG CTCCGGCCGC GGCTTCCGCC
GCGCCGGCGG CCTAA
 
Protein sequence
MLAGVAAVTA TTMALSGVFA GQALAKGAEL LGQPTPGAID LQQAASPLKH HAIWFHNIVL 
MPIITAITLL VLGLLVWIVV RYNAKSNPVP AKFSHNTTVE IIWTIVPVII LMVIAIFSFR
LLFDYNNMPK PYLTVKATGY QWYWGYEYPD QKISEITSVP LSKADADAKK VPYLLAADKP
MVVPVNQVIR VQVTGADVIH AFALPAFGLK TDAIPGRLNE TWFKAEKVGV YYGQCSELCG
VEHSNMPIEI HVVSQPEFDA WVKSKTSPAA PAATAAAAPA AATVTPAATA PASAPAAASA
APAA