Gene Caul_4468 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4468 
Symbol 
ID5901929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4843057 
End bp4844244 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content69% 
IMG OID641564987 
Productphosphoserine aminotransferase 
Protein accessionYP_001686086 
Protein GI167648423 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1932] Phosphoserine aminotransferase 
TIGRFAM ID[TIGR01365] phosphoserine aminotransferase, Methanosarcina type 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0805419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC TCGCCAAGCC GGCGCAACGC CCGGCTCGTC CCGAGTTCTC TTCCGGCCCC 
TGCGCCAAGC GCCCTGGCTG GACCCCCGAA AATCTGAGAA ACGCCGTGCT GGGCCGGTCG
CACCGTTCCA AGCTCGGCAA GGCGCGCCTC AAGGCCGCCA TCGACCAGAC GCGCGACGTG
CTGGAGGTCC CGGCCGACTT CCTGATCGGC ATCGTCCCCG GTTCGGACAC CGGCGCCGTC
GAGATGGCGA TGTGGTCGAT GCTGGGCCAG CGTCCAGTGC AATTGCTGGC CTTCGAATCG
TTCGGCAAGG ACTGGGTCAC CGACGTGACC AAGCAGCTGA AGCTGCCCAA CGTCGAGGTG
CTCGACGCGC CCTACGGCCA GCTGCCCGAC ACCTCCAAGG TCGATCCGGC CAAGGATCTG
GTCTTCACCT GGAACGGTAC CACCTCGGGC GTCCGCGTCC CGAACGCCGA CTTCATCAGC
GCCGACCGCG AAGGCATCGT GATCTGCGAC GCCACCAGCG CCGCCTTCGC CCAGGACCTG
GACTGGACGA AACTGGATGT CGTGACCTTC TCCTGGCAGA AGGCCCTGGG CGGCGAGGGC
GCGCACGGCG TGCTGATCCT GTCGCCCCGC GCCGTGGCGC GCCTGGAGAG CTACACCCCG
GCCTGGCCGA TGCCCAAGCT GTTCCGCATG ACGAAAGCCA ACAAGGACGG GGGCAACAAG
GTCGCCCTCG ACATCTTCGA GGGCGCGACC ATCAACACGC CGTCGATGCT GTGCGTCGAG
GATGCGCTGG ACGCCCTGAA GTGGGCCGCC TCGATCGGCG GTCTGGAAGC CATGCAGGGC
CGCGCCGACC AGAACCTGGC CGTGCTGGCC GATTGGGTCG CCCGCACGCC GTGGGTCGAG
TTCCTGGCCG CCACGCCGGA GATTCGCTCC AACACCTCGG TGTGTCTCAA GGTCGTCGAT
CCCGCGATCG CGGCCCTGTC GGACGACGCC CAGGCCGACT TCGCCAAGAA GCTGGCCAGC
CTGCTCGAGA AGGAGGGCGC GGCCCTCGAC ATCGGCGGCT ATCGCGACGC CCCGGCCGGC
CTGCGCATCT GGTGCGGCGC CACCGTCGAG GCCTCGGACG TCGAAGCCCT GACGCCGTGG
CTCGACTGGG CCTTCGCCAC CGTCTCGGCC GAACTGGCCG CCGCTTAA
 
Protein sequence
MTTLAKPAQR PARPEFSSGP CAKRPGWTPE NLRNAVLGRS HRSKLGKARL KAAIDQTRDV 
LEVPADFLIG IVPGSDTGAV EMAMWSMLGQ RPVQLLAFES FGKDWVTDVT KQLKLPNVEV
LDAPYGQLPD TSKVDPAKDL VFTWNGTTSG VRVPNADFIS ADREGIVICD ATSAAFAQDL
DWTKLDVVTF SWQKALGGEG AHGVLILSPR AVARLESYTP AWPMPKLFRM TKANKDGGNK
VALDIFEGAT INTPSMLCVE DALDALKWAA SIGGLEAMQG RADQNLAVLA DWVARTPWVE
FLAATPEIRS NTSVCLKVVD PAIAALSDDA QADFAKKLAS LLEKEGAALD IGGYRDAPAG
LRIWCGATVE ASDVEALTPW LDWAFATVSA ELAAA