Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_4467 |
Symbol | |
ID | 5901928 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 4841333 |
End bp | 4842913 |
Gene Length | 1581 bp |
Protein Length | 526 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641564986 |
Product | D-3-phosphoglycerate dehydrogenase |
Protein accession | YP_001686085 |
Protein GI | 167648422 |
COG category | [E] Amino acid transport and metabolism [H] Coenzyme transport and metabolism |
COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0468875 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCGCTC CCCGCGTCCT CATCGCCGAC AGCCTGTCCC CCGCCGCCGT GGCGATCTTC ACCGCCCGCG GCGTCCAGGC CGACGTCAAG ACCGGCCTGA CCAAGGCGCA GCTGCTGGAA ATCATCGGCG ACTATGACGG CCTGGCCGTC CGCTCGGCCA CCAAGGCCGA CCCCGAGGTG ATCGCCGCCG CCAAGAAGCT GAAGGTCATC GGCCGGGCCG GCATCGGCGT CGACAACGTC AACATCCCGG CCGCCACCGC CGCCGGCATC GTGGTGATGA ACACCCCGTT CGGCAACTCG ATCACCACGG CCGAGCACGC CATCGCCATG ATGTTCGCCC TGGCCCGCCA ACTGCCGGCG GCCGACGCCA GCACCCAGGC CGGCAAGTGG GAGAAGAACC GCTTCATGGG CGTGGAGCTG TACGCCAAGA CCCTGGGCCT GATCGGCGCG GGCAATATCG GCGGCATCGT CGCCGACCGC GCCCTGGGCC TGAAGATGAA GGTCGTGGCC TATGACCCCT TCCTGTCGCC GGAACGCGCC ATCGAGATCG GCGTCGAGAA GGTCGAGCTG GACGACCTGC TGGCCCGCGC CGACGTCATC ACCCTGCACA CCCCGCTGAC CGACAAGACC CGCAACATCC TGTCGCGCGA GGCCCTGCAG AAGACCAAGA AGGGCGTGCT GATCGTCAAC TGCGCCCGCG GCGGCCTGGT CGACGAGGTG GCCCTGCGCG AACTGCTCGA CAGCGGCCAT GTCGGCGGCG CCGGCTTCGA CGTGTTCACC GAGGAGCCGG CCAAGGCCAA TCCGCTGTTC GGCTCCGACC GCGTGGTGGC CACCCCCCAC CTGGGCGCCA GCACCAACGA GGCCCAGGAG AACGTCGCCC TGCAGGTCGC CGAGCAGATG AGCGACTACC TGCTGACCGG CGCGGTGACC AACGCGCTGA ACAGCCCGTC GATCAGCGCC GAGGAAGCCC CCAAGCTGAA GCCGTTCGTG GCCCTGGCCG AGAAGATCGG CGCCCTGGCC GGCCAGATGG TCGACTTCGG GATCAAGGCC ATCGACATCG CCTATGAGGG CGAGGTCGCG AACCTCAACG TCAAGCCGAT GACCTCGGCC GCCCTGGCCG GGATCCTCAA GCCCATGCTG GCCGAGATCA ACATGGTCTC CGCCCCGGCC GTGGCCAAGG AGCGCGGCAT CACCGTCTCC GAGAGCCGCC AGGAGGTCAG CCCCACCTAT GACAGCCTGA TGCGCATCAC CATCACCACC GAGAAGGGCA AGCGCGCCTT CGCCGGCACG GTGATCGCCG GCGCGCCGCG CATGGTCGAG GTCAAGGGCA TGGAGCTGGA CGCGGGCTTC GCCCCGGCCA TGCTCTACAT CAACAACCTC GACAAGCCGG GCTTCATCGG CGCCCTGGGC ATGCTGTTGG GCGAGGCGGG CGTCAACATC GCCACCTTCA ACCTCGGCCG CCTGTCGGCC GACGAAGACG CCATCGCCCT GGTCGGCGTC GATCAGGCCC CGGACGAGGC CCTTCTGGCC AAGATCCAGG CCCTGCCACA CGTCAAGGAA GCCCGCGCGC TGACGTTCTG A
|
Protein sequence | MTAPRVLIAD SLSPAAVAIF TARGVQADVK TGLTKAQLLE IIGDYDGLAV RSATKADPEV IAAAKKLKVI GRAGIGVDNV NIPAATAAGI VVMNTPFGNS ITTAEHAIAM MFALARQLPA ADASTQAGKW EKNRFMGVEL YAKTLGLIGA GNIGGIVADR ALGLKMKVVA YDPFLSPERA IEIGVEKVEL DDLLARADVI TLHTPLTDKT RNILSREALQ KTKKGVLIVN CARGGLVDEV ALRELLDSGH VGGAGFDVFT EEPAKANPLF GSDRVVATPH LGASTNEAQE NVALQVAEQM SDYLLTGAVT NALNSPSISA EEAPKLKPFV ALAEKIGALA GQMVDFGIKA IDIAYEGEVA NLNVKPMTSA ALAGILKPML AEINMVSAPA VAKERGITVS ESRQEVSPTY DSLMRITITT EKGKRAFAGT VIAGAPRMVE VKGMELDAGF APAMLYINNL DKPGFIGALG MLLGEAGVNI ATFNLGRLSA DEDAIALVGV DQAPDEALLA KIQALPHVKE ARALTF
|
| |