Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_4427 |
Symbol | tolB |
ID | 5901888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 4796296 |
End bp | 4797621 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641564945 |
Product | translocation protein TolB |
Protein accession | YP_001686045 |
Protein GI | 167648382 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
TIGRFAM ID | [TIGR02800] tol-pal system beta propeller repeat protein TolB |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.500534 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTGA AGTCCGTCTT CACCGGCCCC CTGGCGGCTT GGGCGACAGC CGCCGTCCTG GCGCTGTCCA TGGCCGCCCT CGCGCCGACC GTCGCCCGCG CCCAGATCGA GGTCGATATC GACAAGGGCG CGGTCAAGCC GCTGCCGGTC GCCATTCCAG CCTTTTCGGG CGGCGGCCGC GGCGCCGACA TCGCCCAGGT CATCAGCGGC AATCTCGAGC GCTCGGGGCT GTTCCAGCCG CTGAACGTGG CCAATGTCGC CGACAAGCTG GCCGACGTGA ACGTCCAGCC GCGCTTCCCC GACTGGCAGG CCACCGGGGC CCAGGCCCTG ATCAACGGCC AGGTGACGGT CGGCGCCGAC GGCGTGCTGC GCGTCGACTT CCGCCTGTGG GACACCTTCA GCCAGCAACA GCTTCTGGGC CTGCAATTCA CCTCGACCGC CGAGAACTGG CGGCGGGTCG CCCACAAGAT CAGCGACGCG GTCTACGAGC GGCTGACCGG CGAGAAGGGC TATTTCGACA CCCGCGTGGT GTTCGTCGCC GAGAGCGGCG GCAAGCTGAC GCGCGTCAAG CGTCTGGCGA TCATGGACCA GGACGGCGCC AACCCGCAGT ACCTGACCGA CGGCTCCTAC ATCGTCATGA CCCCGCGCTT CTCCTCGACC AGCCAGGAGA TTACCTACAT GGCGCTGCGG CCCACCGGGT CGAGCATCTA CCTGACCAAC CTGGAGACGG CTCGCACCGA GACCATCGGC AAGTTCCCGG GCATGGTCTT CGCCCCGCGC TTCTCGCCGG ACGGCGGCAA GGTGGCCTTC TCGGTCGAGA AGGGCGGCAA CAGCGACATC TACGTGATGG ACCTGCGCAG CCGCCAGTCG ACGCGGATCA CCACCGACCC GGCCATCGAC ACTTCGCCGT CGTTCTCGCC GGACGGATCG AAGATCGTCT TCAACTCCGA CCGCGGCGGC CAGGCCCAGC TCTACATCAT GAACGCCGAC GGCAGCGGCG TGCGCCGCAT CTCGTACGGC GGCGGCCGCT ACACCACGCC GGTGTGGAGC CCGCGCGGCG ACTTCATCGC CTTCACCAAG CAGACCGGCG GCGAATTCCA CATCGGGGTC ATGAAGGTCG ATGGCGGCGA CGAGCGGCTG CTGACCACCA GCTATCTCGA CGAAGGCCCG ACCTGGGCGC CCAACGGCCG GGTGCTGATG TTCTCGCGCG AGGGCTCCAG CGGCAATTCG CGGCTCTGGA CGGTGGACAT CACCGGCCGG ATCCTGCGCC CCGCCGCCTA TACGGGCGCG GCGTCAGACC CCGCCTGGTC GCCGCTTCTG GATTGA
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Protein sequence | MNLKSVFTGP LAAWATAAVL ALSMAALAPT VARAQIEVDI DKGAVKPLPV AIPAFSGGGR GADIAQVISG NLERSGLFQP LNVANVADKL ADVNVQPRFP DWQATGAQAL INGQVTVGAD GVLRVDFRLW DTFSQQQLLG LQFTSTAENW RRVAHKISDA VYERLTGEKG YFDTRVVFVA ESGGKLTRVK RLAIMDQDGA NPQYLTDGSY IVMTPRFSST SQEITYMALR PTGSSIYLTN LETARTETIG KFPGMVFAPR FSPDGGKVAF SVEKGGNSDI YVMDLRSRQS TRITTDPAID TSPSFSPDGS KIVFNSDRGG QAQLYIMNAD GSGVRRISYG GGRYTTPVWS PRGDFIAFTK QTGGEFHIGV MKVDGGDERL LTTSYLDEGP TWAPNGRVLM FSREGSSGNS RLWTVDITGR ILRPAAYTGA ASDPAWSPLL D
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