| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4423 |
|---|
| Symbol | |
|---|
| ID | 5901884 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 4790977 |
|---|
| End bp | 4792857 |
|---|
| Gene Length | 1881 bp |
|---|
| Protein Length | 626 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641564941 |
|---|
| Product | ATP-dependent metalloprotease FtsH |
|---|
| Protein accession | YP_001686041 |
|---|
| Protein GI | 167648378 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0465] ATP-dependent Zn proteases |
|---|
| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.765362 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTCA AGACCCTGGG CATCTGGCTG GCGATCGCGG TGGCGGTGTT GGCCGCCTAT
GTCGTGACTC AGAGCGGCAA GGCCGGCGGC GGCAACGGCG GCGAGATGAG CTACTCGCAG
CTGCTGAAGA ACATCGACAG CGGCGACGTC AAGAAGGCCG ACATCAACGG CGATGTGGTC
AAGATCGAGC CGCGCACGGG CAAGACCTAC GCGGTCAATG TCCCGCCCAA TTCCGAGGAC
CTGGTCAAGC GTCTCGAGGC GCGCAACGCC GAGATCGTCT ACCAGCGCAA CAGCATCAGC
CTGCTGGGCA TCCTGTTCCA GATGCTGCCG ATCCTGCTGC TGATCGGCGT GTGGATCTTC
TTCATGCGCC AGATGCAGGG CGGCACCAAG GGCGCCATGG GCTTTGGCAA GTCCAAGGCC
CGGCTGCTGA CCGAGAACAA GAACCGCGTG CTGTTCGACG ACGTCGCCGG CGTCGATGAG
GCCAAGGAAG AGCTGCAGGA AGTGGTCGAG TTCCTCAAGG ACCCGGCCAA GTTCCAGCGC
CTGGGCGGCA AGATTCCCAA GGGCGCCCTG CTGGTCGGCC CGCCCGGCAC CGGCAAGACC
CTGATCGCTC GCGCCGTCGC GGGTGAGGCC GGCGTGCCGT TCTTCACCAT CTCGGGTTCG
GACTTCGTCG AGATGTTCGT TGGCGTCGGC GCCAGCCGCG TGCGCGACAT GTTCGAGCAA
GCCAAGAAGA ACGCCCCCTG CATCATCTTC ATCGACGAAA TCGACGCCGT CGGCCGCCAC
CGTGGCGCGG GCCTGGGCGG CGGCAACGAC GAGCGCGAGC AGACGCTGAA TCAGCTGCTG
GTCGAGATGG ACGGCTTCGA GGCCAACGAA GGCATCATCC TGATCGCCGC CACCAACCGT
CCAGACGTGC TGGACCCGGC CCTGCTGCGT CCGGGCCGCT TCGACCGCCA GGTCGTGGTG
CCCAATCCCG ACGTCATGGG CCGCGAGAAG ATCATCCGCG TGCACATGAA GAACGTGCCG
CTGGCCGCCG ACGTCGACGT CAAGACCCTG GCCCGCGGCA CCCCCGGCTT CTCGGGCGCC
GACCTGGCCA ACCTGGTCAA CGAGGCGGCC CTGACCGCCG CGCGCAAGAA CCGTCGCATG
GTCACCATGC ACGACTTCGA ATACGCCAAG GACAAGGTGA TGATGGGTGC CGAGCGTCGC
TCGATGGCCA TGAGCGAGGA TGAAAAGCGC AACACCGCCT ATCACGAGGG CGGTCACGCC
CTGGTGGCCC TCAGCGTCCC GGTCGCCGAC CCGGTGCACA AGGCCACCAT CGTGCCGCGC
GGTCGCGCCT TGGGCATGGT CATGCAGTTG CCGGAGGGCG ATCGCTATTC CATGAACTTC
ACCCAGATGA CCTCGCGCCT GGCCATCATG ATGGCCGGCC GCGTGGCCGA GGAGCTGATC
TTCGGCAAGG AGAACATCAC GTCCGGCGCC TCCAGCGACA TCAGCGCCGC CACCAGCCTG
GCCCGCAACA TGGTCACCCG CTGGGGCTTC TCCGACGAGC TGGGCACCGT GGCCTATGGC
GACAACCAGG ACGAGGTGTT CCTGGGCCAT TCGGTGGCCC GCACCCAGAA CGTCTCGCCC
GAGACCATGA TCAAGATCGA CAGCGAAGTG CGTCGCCTGG TCAAGGGCGG CGAGGACGAG
GCCCGCCGGA TCCTGACCGA GAAGCTGGAA CAGCTGCACT CGATCGCCAA GGCGCTGCTG
GAGTTCGAGA CCCTGTCGGG CGACGAGATC ATCGGCGTGA TGAAGGGCGT CCAGCCCACC
CGCGAGGAAG ACGAGACCAA CAAGATGCCG ACCGGCCCGA CGGCCTCGGT GCCGGTCTCG
CCCACCGGCG TGACGGCGTA G
|
|---|
| Protein sequence | MNFKTLGIWL AIAVAVLAAY VVTQSGKAGG GNGGEMSYSQ LLKNIDSGDV KKADINGDVV
KIEPRTGKTY AVNVPPNSED LVKRLEARNA EIVYQRNSIS LLGILFQMLP ILLLIGVWIF
FMRQMQGGTK GAMGFGKSKA RLLTENKNRV LFDDVAGVDE AKEELQEVVE FLKDPAKFQR
LGGKIPKGAL LVGPPGTGKT LIARAVAGEA GVPFFTISGS DFVEMFVGVG ASRVRDMFEQ
AKKNAPCIIF IDEIDAVGRH RGAGLGGGND EREQTLNQLL VEMDGFEANE GIILIAATNR
PDVLDPALLR PGRFDRQVVV PNPDVMGREK IIRVHMKNVP LAADVDVKTL ARGTPGFSGA
DLANLVNEAA LTAARKNRRM VTMHDFEYAK DKVMMGAERR SMAMSEDEKR NTAYHEGGHA
LVALSVPVAD PVHKATIVPR GRALGMVMQL PEGDRYSMNF TQMTSRLAIM MAGRVAEELI
FGKENITSGA SSDISAATSL ARNMVTRWGF SDELGTVAYG DNQDEVFLGH SVARTQNVSP
ETMIKIDSEV RRLVKGGEDE ARRILTEKLE QLHSIAKALL EFETLSGDEI IGVMKGVQPT
REEDETNKMP TGPTASVPVS PTGVTA
|
|---|
| |