| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4331 |
|---|
| Symbol | |
|---|
| ID | 5901792 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 4704519 |
|---|
| End bp | 4706156 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641564849 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_001685949 |
|---|
| Protein GI | 167648286 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.364366 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCCTG TGGATTGGCT GTTAAATCCT TCCGGACTAA CGCCTCATGG CTTTTGCCTG
AGTTGGGCCC CAGGTCTGAT CGCGCTGCAC GTCGGGTCCG ATGTGCTCAT CGGTCTGGCC
TATTTCTCCA TTCCGCTGGC CATCGCCGCC TTCGTCAAGC AGCGGCCGGA TATCCGTTAC
GGGTGGGTCG CCTATCTCTT CGTTGGCTTC ATACTGGCCT GCGGCGCGAC GCACCTGATG
TCGATCTTCA CCCTCTGGGT CCCGGCCTAC GGCGTGGAAG GCCTGATCAA GCTGGTCACG
GCGATCCTGT CGATCGCCAC CGCGGCCATC CTTTGGCCGT TGATGCCCAA ACTGCTGGCC
GTGCCGTCGG CGGCGCATCT TGAGCGCCTC AACGCCGAAC TGGCCGACAC TGTGGCCGCG
CAAGGCCGCA CGGCCGCGCT GTTGCGGGAG AGCGAAGCCC AGGTGCGCTC TTCAAATTTG
GCGCTGGAGC GGCGGGTCGA GGAGCGCACG GCGCAGCTGC GGGCGACCAA TGTCCAACTG
ACCGAGGCCT TGGCGGAACG GGCCCTGGCC GAGCGGGCCC TGGCCCGGAG CGAGGAGGCC
TTTCGCGCCA GTTTCGAGGC CGCCGCCGTG GGCAAGGCCC AGAGCGATCC CCTGTCGGGA
CGGATTATCC GCGCCAACCG CGCCTTCGCC CAGATGCTGG GCTACGAGCC GGAGGAGATC
GTCGGCCGGC TGGGCTGGGA GTTCACCTGG CCCGAGGACC GCGACGCGGA GATGGCGGAG
TATAACCGCG TCGTCGCGGA CGAAATCCCC GCCTATGTGC GGGAGAAGCG CTACGTGCGC
CGCAACGGCG AACCGTTCTG GGGCCGGGTT TCGGCCAGTA TCGTGCGCAA CCCTGAAACG
CTGGAACCGG TGCTGACAGT CGCCGTCATC GAGGACATCG ACGAGACCTA CAAGGCGCAG
AGCGCGTTGC GGGACGCGAC ACAGGAACTG GAGCTTCTGG TCGAGGAGCT GACCTCCACG
GTGAGCCAGC GCGACCTGCT GCTGCGCGAG GTCTATCACC GCGTGAAGAA CAACCTGCAG
ATCGTCGACA GTCTGCTGGT CATGCAGGCT CGCAAGCTGT CTGACCCGGA AGCCAAGCAG
GCCCTTCTGG GGCTGCGCGG CCGGATCTAC GCCCTGGGCC TCGTGCACGG ACAGTTGATG
GGGTCGAAGG ACCTCAGGAC GTTCGACATC ACGCCGTTCC TGCGGGAGCT GTCTTCCAAC
ATCGTCGATG GCGTGGCTGG CAATGAGGTC CAGCTGACCG TTCAGGGCGT CCCGATGGAC
GTGGGCCTGG ACTTCGCCAT CCCGCTGGGG CTGCTGGTCA CCGAACTCGT AACCAATTCG
CTCAAGCACG CGTTTCCAGC GGGCGTCGGG ACGATCGATG TCGGCCTCGG CCGAACCGAG
GAAGGGGACG TCATGCTCAC CGTCGCGGAC AACGGCGTGG GCCATGACGG GAGCGAAACG
CCGGCTCGCG GCGTGAGATC CACGCTTGGC GTCACCATCA TCGAGGGGCT GGTCGCGCAA
TTGAAGGGGA CGATCATGGT GCGAAAAGAC AATGGAACAC GAACCGAGAT CCGGGTCGCC
GCGCCGGTGC TGTCATGA
|
|---|
| Protein sequence | MSPVDWLLNP SGLTPHGFCL SWAPGLIALH VGSDVLIGLA YFSIPLAIAA FVKQRPDIRY
GWVAYLFVGF ILACGATHLM SIFTLWVPAY GVEGLIKLVT AILSIATAAI LWPLMPKLLA
VPSAAHLERL NAELADTVAA QGRTAALLRE SEAQVRSSNL ALERRVEERT AQLRATNVQL
TEALAERALA ERALARSEEA FRASFEAAAV GKAQSDPLSG RIIRANRAFA QMLGYEPEEI
VGRLGWEFTW PEDRDAEMAE YNRVVADEIP AYVREKRYVR RNGEPFWGRV SASIVRNPET
LEPVLTVAVI EDIDETYKAQ SALRDATQEL ELLVEELTST VSQRDLLLRE VYHRVKNNLQ
IVDSLLVMQA RKLSDPEAKQ ALLGLRGRIY ALGLVHGQLM GSKDLRTFDI TPFLRELSSN
IVDGVAGNEV QLTVQGVPMD VGLDFAIPLG LLVTELVTNS LKHAFPAGVG TIDVGLGRTE
EGDVMLTVAD NGVGHDGSET PARGVRSTLG VTIIEGLVAQ LKGTIMVRKD NGTRTEIRVA
APVLS
|
|---|
| |