Gene Caul_4231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4231 
Symbol 
ID5901692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4596302 
End bp4597069 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content68% 
IMG OID641564751 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001685851 
Protein GI167648188 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGGC TGAAAGACAA GGTCGCGATC ATCACGGGCG CGGCGCTGGG ACTGGGCAGG 
GCCACGGCGC TGCGCATGGC GGAGGAAGGC GCTTCGGTCG CCATCCTGGA CCTGCTCGAT
GACCAGGGCG AAGCCCTCGC CGCGGAGATC GCGGCCTCGG GTCGCGCGGC GCGCTACTGG
CGATGCGACG TCAGCAGCGA GGTCCAGGTG GCGCGGGTGA TCGACGAGGC GGCCGCGCAT
TTCGGGCGGA TCGATGTGCT GGTGAACAAC GCCGGCGTGG CGGGGGCCGA CAAGCCCACT
CACGAGCTGA CCGAGGCCGA ATGGGATTGG GTCCAGGCCA TCAACGTCAA GGGCGTGTTC
TTCTGCACCA AGCACGCCAT CGCCCATCTG CGCCGGGCCG GCGGCGGCAG CATCATCAAT
CTGTCGTCGA TCTACGGTTT GGTGGGCGCG GCGGACGTCC CGCCCTACCA TGCCTCCAAG
GGCGCGGTCC GGCTGATGAG CAAGACGGAC GCCCTCACCT ACGCCGGCGA TCGGATTCGC
GTGAACTCGA TCCATCCGGG CTTCATCTGG ACGCCCATGG TGGAACACCA TCTCGGCGCC
CAAGGGGACC TGGAAACCAA CCGTGAGGCC GCCGCCAGCC TTCATCCGCT CGGGCACATG
GGCGACCCCG ACGATGTCGC CTGGGGGGCC GTCTATCTGG CGTCGGACGA AGCCAAGTTC
GTGACAGGCT CGGAACTGGT CATCGACGGC GGCTATACGG CGCGCTGA
 
Protein sequence
MNRLKDKVAI ITGAALGLGR ATALRMAEEG ASVAILDLLD DQGEALAAEI AASGRAARYW 
RCDVSSEVQV ARVIDEAAAH FGRIDVLVNN AGVAGADKPT HELTEAEWDW VQAINVKGVF
FCTKHAIAHL RRAGGGSIIN LSSIYGLVGA ADVPPYHASK GAVRLMSKTD ALTYAGDRIR
VNSIHPGFIW TPMVEHHLGA QGDLETNREA AASLHPLGHM GDPDDVAWGA VYLASDEAKF
VTGSELVIDG GYTAR