Gene Caul_4117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4117 
Symbol 
ID5901579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4474025 
End bp4474324 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content74% 
IMG OID641564638 
ProductRNA-binding S4 domain-containing protein 
Protein accessionYP_001685739 
Protein GI167648076 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.27509 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG AGGACGCCGG TTCCGATCCA GGCCACTGCC GCGCCGACGT CTGGCTGTGG 
CGCGCGCGGT TCTTCAAGAC CCGCTCCCTG GCCGGCCGCT TCGTCGAGGA AGGCCGCATC
CGCCTGACCC GGGCCGGCGC CGAGAGCCGC GTCGACAAGC CTTCGCGCGG CCTGCGGCTC
GGCGATGGCC TGGTGTTCGC GATCGGCGGC CGGATCGTCG CGGTGCGCGT GGTCGGCTTG
GGCGAGCGAC GCGGCCCGGC GACCGAGGCG CGGGAGCTGT ACGAAGCGGT GGAAGGGTAG
 
Protein sequence
MSDEDAGSDP GHCRADVWLW RARFFKTRSL AGRFVEEGRI RLTRAGAESR VDKPSRGLRL 
GDGLVFAIGG RIVAVRVVGL GERRGPATEA RELYEAVEG