| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_4114 |
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| Symbol | |
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| ID | 5901576 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | + |
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| Start bp | 4469664 |
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| End bp | 4471742 |
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| Gene Length | 2079 bp |
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| Protein Length | 692 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641564635 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001685736 |
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| Protein GI | 167648073 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.352586 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAGA CGGCCGTGCG CACCCAGGCC TCGATCTCGA TCGACGACGC CAAGACGCTG
AGCGCCCTGA TGGACGCGTT CGAGACGTTC GTGCGCCATG CGCCGTTCGC GACCGCCCTG
GTCGACAACG CCTTTCGCCT GACCGCCGTC AGCCCCGACT GGGCCGATCA CACCCTGACG
CCCGGCCTGG AGATCGGCGA CGACTTCCGC CGCGCCCTGG CTAGCCCCGA GGACGTCGAA
AGCCTGGAGC GCTGCGTGGC GTTCGGCGAG CCGTTCTCGC GCTATCGCTC GGTCGAGACG
GAGGGGACCC AGCCGCGCAT CTGGCGCACG GAATTCGCCG CCGCCCTCAC CGAGACGGGC
CGCGCGCTGG CGGTGATCGT CACCGCCCGC GACGTCACCG GCTATGCCGA GACCGCCCTC
AAGGCCGAGT GCGACCAGCA GCGGCTGAGG ATGGCGCTCG AGCTCGACGA CCTGATCGTC
CGCGAATACG ACCTGCGGAC CGGCGAGATC CATTTCTCGG GCACGGCGCC CGACCTCGAG
CGGTGGTGCC AGTTCAAGGA CGATCCGCTG GAGGTCGTCC ATCCCGACGA TCGCGAGAAG
ATGGCCGAGC TGGTCCGCGC CCGGAAGGAC GGCGAGGCGC AGGTCTTCGA GTTCCGCCTC
AACCGCGACG ACGGGGTCGA GACCTGGGTG CGCTCGGTGG GCAAGCGGTT CCTCGGGGCC
GACGGCAAGC CCGAGCGGCT GGTCAACCTG TTCAAGGATA TCACCGACCG CCGCCGCCAG
ACGGAAGCCG TCGAGAACCT GGCCTTCAAG GATCCGCTGA CCGGCCTGCC CAACCGGGCC
TATTTCAATC GCAAGTTCCA GGAGGCCGTC GACGCCTCGG AGATCATGGG CGAGCTGTTC
GGCCTGATCA TGATCGACGT CGACCACTTC AAGGACATCA ACGACACCCT GGGCCACGAC
GCCGGCGACG CCCTGCTCAA GCGCCTGGCC GAGATGCTGC ACGCCGCCTT CCGCTCGGGC
GACACCGTGG CGCGGCTGGG CGGCGACGAG TTCGCGGTGA TCCTGCGCGG CCTGCATTCC
GAGGCCGACA TGATGCGGCC CGTCAACGCT CTGCAGGACC TGCTGCGCCG GCCCATCGAG
CACGGCGGGC GCAGCTTTTC GGTCAGCGCC AGCATCGGGG CGGCCCTGCA CGGCGACCTC
GACGCCGACC CCAGCCACAT GATCAAGAAC GCCGACATCG CGCTCTACCG GGCCAAGGAC
GAAGGCCGCA ATCGCAGCGT GGTGTTCACC CCGGCCATGC GCTCGTCGCT GGAACAGCGG
ATCGAGCTGC TGCGCGACGT CCGCGCGGCG ATCACCGCCC GGGAGTTCGT CCTCTACTAC
CAGCCCGTGG TCGACATCGC CTCCAACAGC GTCAGCGGTT TCGAGGCCCT GATGCGCTGG
GACCACCCCG AACAGGGCGT CCTGACCCCC GACCGGTTCA TGTGCGCCTT CGAGGACCAG
GACCTGTCGC TGAAGCTGGG CGACCTGGCC CTCGAGGGCG CGCTCAAGCA GATGCGCGAC
TGGATCGATC AGGGCGTCGA GTTCGGCCGC GTGGCGGTCA ACATCTCGGC CGCCCAGTTC
CGCAGCGGAC GTCTGGCTGA AGAGGTTCAG GATCGGCTCG CCCGCTGGGG CGTGCCGTGC
GACCGCCTGA CCATCGAGGT CACCGAGAAC GTCTATATGG GTTGGGGCTC GGAGATGGTC
AGCGACACCG TCCGCGCGCT GCACAAGGCC GGGGTAATGA TCGCCCTGGA CGACTTCGGC
ACGGGCTACG CCAGCCTGGC CAACCTGCGC CAGTTCCCGA TCGACCGGCT GAAGATCGAC
AAGTCCTTCG TCCAGAACAC CGAGGACGCG GCCATCGTCA AGGCGGTGAT CACCCTGGGC
TCGTCGATGG GCATGAAGGT GGTGGCCGAG GGGGTCGAGG ACCAGGCCCA ACTGGACGCC
CTGGCCGGCT ATGGCTGCGA TCAGATCCAA GGCTACCACT TCTCACGGCC CATGCCGGCG
GCGAGGGTGC CGGGGTATCT GAACGGGTTC GGGAAGTAG
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| Protein sequence | MTKTAVRTQA SISIDDAKTL SALMDAFETF VRHAPFATAL VDNAFRLTAV SPDWADHTLT
PGLEIGDDFR RALASPEDVE SLERCVAFGE PFSRYRSVET EGTQPRIWRT EFAAALTETG
RALAVIVTAR DVTGYAETAL KAECDQQRLR MALELDDLIV REYDLRTGEI HFSGTAPDLE
RWCQFKDDPL EVVHPDDREK MAELVRARKD GEAQVFEFRL NRDDGVETWV RSVGKRFLGA
DGKPERLVNL FKDITDRRRQ TEAVENLAFK DPLTGLPNRA YFNRKFQEAV DASEIMGELF
GLIMIDVDHF KDINDTLGHD AGDALLKRLA EMLHAAFRSG DTVARLGGDE FAVILRGLHS
EADMMRPVNA LQDLLRRPIE HGGRSFSVSA SIGAALHGDL DADPSHMIKN ADIALYRAKD
EGRNRSVVFT PAMRSSLEQR IELLRDVRAA ITAREFVLYY QPVVDIASNS VSGFEALMRW
DHPEQGVLTP DRFMCAFEDQ DLSLKLGDLA LEGALKQMRD WIDQGVEFGR VAVNISAAQF
RSGRLAEEVQ DRLARWGVPC DRLTIEVTEN VYMGWGSEMV SDTVRALHKA GVMIALDDFG
TGYASLANLR QFPIDRLKID KSFVQNTEDA AIVKAVITLG SSMGMKVVAE GVEDQAQLDA
LAGYGCDQIQ GYHFSRPMPA ARVPGYLNGF GK
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