Gene Caul_4071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4071 
Symbol 
ID5901533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4409368 
End bp4410675 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content67% 
IMG OID641564592 
Productacyl-CoA dehydrogenase domain-containing protein 
Protein accessionYP_001685694 
Protein GI167648031 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.796967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTTCG AAATCTCCGC CACCCAGCGC AGCTTCCTCG ACCGCGTCAC CGCGTTCATG 
GACGAGCACA TCGTTCCCGC CGTCCCGGTC TACGACGCCG AGATGAACGT GCTGGGGGCC
GAGCGCTGGA AGGTCGTCCA GGTGGTCGAG GAGCTGAAGG CCAAGGCCAA GGCCGCCGGT
CTGTGGAACT TCTTCATGCC GCCGCACAGC GGCCAGGTGC ATGTCGACGA CTCGTTTGTC
TTCGAGGGCG TGCAACTGAC CAATCTCGAA TACAGCCTGA TCGCCGAACA GCTGGGCAAG
ATCGGCTTCG CGTCCGAGGT GTTCAACTGC TCGGCGCCCG ACACCGGCAA CATGGAAGTG
CTGATGCGCT ACGGCACGCT GGAGCAGAAG GAGCGCTGGC TGCGCCCGCT GATGAACGGC
GAGATCCGCA GCGCCTTCCT GATGACCGAG CCGGCGGTGG CCAGCTCGGA CGCCACCAAT
ATCGAGACCC GCATCGAGCG CGACGGCGAC CACTATGTGA TCAACGGCCG CAAGTGGTGG
AGCTCGGGCG TCGGCGATCC GCGCTGCAAG GTCGCCATCG TCATGGGCAA GACCGACCCC
AACAACGCCA GCCGCCACGC CCAGCAGAGC CAGGTCCTGG TGCCGATGGA CGCCCCCGGC
ATCGAGATCG TCCGTATGCT GCCGGTGTTC GGCTATGACG ACGCCCCGCA CGGCCACGCC
GAGGTGATCC TCAAGGACGT GCGCGTGCCG GTCGAGGACG CCCTGCTGCT GGGCGAGGGC
CGCGGCTTCG AGATCGCCCA GGGCCGCCTG GGTCCCGGCC GCATCCACCA CTGCATGCGC
ACCATCGGCA CCGCCGAGGT GGCGCTGGAA AAGATGTGCA AGCGCCTGAT GAGCCGCAAG
GCGTTCGGCA AGTACATCTC CGACCACTCA GTCTGGGAAG AGCGCGTCGC CGAGGCCCGC
ATCAATATCG AGATGTGTCG CCTGCTGTGC CTGAAGGCCG CCGACATGAT GGACAAGGCC
GGCAACAAGT CGGCCCGCCT CGAGATCGCG ATGATCAAGG TCGCGGCCCC GCGCCTGGCC
CTGAAGATCA TCGACGACGC CATCCAGGCC CATGGCGGCG GCGGGGTCAC CACCGACTTC
GGTCTGGCCA AGGCCTATGC CGGCATCCGC ACCCTGCGTC TGGCCGACGG CCCGGACGAG
GTCCACGAGC GCACCATCGC CCGGATGGAA TACGGTAAGT ACGGAGACCT GGCCTACCAG
CAGAAGGTCG AGCGCGAGGC CGCTCGGCAC GTGCCGGGGA TCCGCTAG
 
Protein sequence
MDFEISATQR SFLDRVTAFM DEHIVPAVPV YDAEMNVLGA ERWKVVQVVE ELKAKAKAAG 
LWNFFMPPHS GQVHVDDSFV FEGVQLTNLE YSLIAEQLGK IGFASEVFNC SAPDTGNMEV
LMRYGTLEQK ERWLRPLMNG EIRSAFLMTE PAVASSDATN IETRIERDGD HYVINGRKWW
SSGVGDPRCK VAIVMGKTDP NNASRHAQQS QVLVPMDAPG IEIVRMLPVF GYDDAPHGHA
EVILKDVRVP VEDALLLGEG RGFEIAQGRL GPGRIHHCMR TIGTAEVALE KMCKRLMSRK
AFGKYISDHS VWEERVAEAR INIEMCRLLC LKAADMMDKA GNKSARLEIA MIKVAAPRLA
LKIIDDAIQA HGGGGVTTDF GLAKAYAGIR TLRLADGPDE VHERTIARME YGKYGDLAYQ
QKVEREAARH VPGIR