Gene Caul_4005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4005 
Symbol 
ID5901467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4335344 
End bp4336657 
Gene Length1314 bp 
Protein Length437 aa 
Translation table11 
GC content69% 
IMG OID641564526 
Productglycoside hydrolase family protein 
Protein accessionYP_001685628 
Protein GI167647965 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGA CGCGTAGGAC CGTGCTGGCG GGCGTGACGG CGGCGACGGC GATCGGGGCG 
GCTCCGGCCT TGGCCGCGCC GCGCCGCGCG ATGCCGAAGG GGTTCCTCTG GGGCGCGGCG
ATCTCGGCGC ACCAGAGCGA GGGCAACGAC GTCAATTCCG ACAGCTGGCT GCTCGAGACC
CTGCCGGAGA CGGTCTACAA GGACCCCTCG GGCGACGCCT GCGACAGCTA TCATCGCTAT
GAACAGGACT TCGCGATCGC CCGCGCGATC GGGCTGAACT GCTATCGGTT CGGGATCGAG
TGGGCCAGGA TCGAACCCGA ACCGGGCCGG TTCTCGCAAG CCGAACTGGA CCACTACAGG
ACGGTCCTGA CCGCCTGCCG CGCGCACGGC CTGCTGCCGA TCGTCACCTA CAACCACTTC
ACCGTGCCGC TGTGGTTCGC CATGCGCGGC GGCTGGGAGG CGCCCGACAG CGCCGACCTG
TTCGCGCGGT TCTGCGAGCG GGCGACCCGC GCCCTGGGCG ACCTGATCGG CATGGCGTCG
CCGTTCAACG AGGCCAACAT CCACCTGCTG GCCAGGATCA TGCGGATGGG CGCGACCCCC
GAATACCTGG CCAAGCGGCG CGCGATGATC GCCGCCGCCG CGCGGGCGAC CAACGCGCCG
GGGTTCTCGT CCATCCTGTT CGCCGACCCC GATCGCATCG ACGCCCACCT GCTCGACGCC
CACGCCAAGG CCTACCAGGC GATCAAGGCG GGACCCGGCG ACTTTCCGGT CGGCGTCACC
CTGACGACCC AGGCCGTCGA GGCGGTGGGC GAGGGCAGCA TCGCCCCTCG GATGGAGGCG
ATGCTCTATG GCCAGTGGTG GGACGCGGTG AACGCCAGCG ACTTCGTCGG CGTGCAGACC
TACACGCGGT TCCGGTTCGA CGTGAAGGGC GCCGCGCCGC CGCCGCCGGG GGCGGAGATG
ACCGCCGCGG GCTACGAATA TTATCCGCGG GCGCTCGGCG ACACGATCCG CCTCGCCGCG
CGCAAGACCA TCAAGCCCAT CTTCGTCACC GAAAGCGGCG TCGCCACCGA CGACGATACG
CGCCGTGTCG CCTGGCTCGA CGCCAGCGTC GCCGAGATCG AGCGCTGCCT GGGCGAGGGG
ATCGACGTCA AAAGCTATAT CTACTGGTCG CTGCTCGACA ATTTCGAGTG GACGCAGGGG
TATGGCCAGC ATTTCGGCCT GGTGGCCGTC GACCGCGACA CCTTTGTCCG GACGCCGAAA
CCCAGCGCCC AGCACTTCGC GCGGCTCGTG CGCGGCTCTC GAAACCATGG ATAG
 
Protein sequence
MATTRRTVLA GVTAATAIGA APALAAPRRA MPKGFLWGAA ISAHQSEGND VNSDSWLLET 
LPETVYKDPS GDACDSYHRY EQDFAIARAI GLNCYRFGIE WARIEPEPGR FSQAELDHYR
TVLTACRAHG LLPIVTYNHF TVPLWFAMRG GWEAPDSADL FARFCERATR ALGDLIGMAS
PFNEANIHLL ARIMRMGATP EYLAKRRAMI AAAARATNAP GFSSILFADP DRIDAHLLDA
HAKAYQAIKA GPGDFPVGVT LTTQAVEAVG EGSIAPRMEA MLYGQWWDAV NASDFVGVQT
YTRFRFDVKG AAPPPPGAEM TAAGYEYYPR ALGDTIRLAA RKTIKPIFVT ESGVATDDDT
RRVAWLDASV AEIERCLGEG IDVKSYIYWS LLDNFEWTQG YGQHFGLVAV DRDTFVRTPK
PSAQHFARLV RGSRNHG