Gene Caul_4002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_4002 
Symbol 
ID5901464 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4331795 
End bp4332676 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content69% 
IMG OID641564523 
ProductSMP-30/gluconolaconase/LRE domain-containing protein 
Protein accessionYP_001685625 
Protein GI167647962 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3386] Gluconolactonase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.846723 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGAAC CCATCTGCGT CTGGGACCTG AAGGCCACGC TTGGCGAGGG GCCGATCTGG 
TCGGCCGAGG AGCAGGCCGT GTGGTTCGTC GACATCAAGG GCCACAAGGT CCACCGTTTC
CATCCGGCCA GCGGCGCGAC GGCCAGCTTC GACGCCCCCG ACCAGGTCAC CTTCCTGGCT
CCCCACGCCG GCGGCGGCGG GTTCGTGGCC GGCCTGAAGA GCGGCCTGCA TCGCTTCGAT
CCGACGACCG GCGCCTTCGT CTTCCTGGCC CAGATCGAAC CGCCGGAACT GAACAACCGT
CCCAACGACG CCACGGTCGA CGCCGAGGGC CGCCTGTGGT TCGGCACCAT GCACGACGGC
GAGATGACCC CGACCGGCGC GCTCTACCGC CTGAGCGCCG ACGGCAAGCC TATCCAGCAG
GACGAAGGCG TCTGCATCAC CAACGGCCCC TGCGCGTCGC CCGACGGCAA GACCTTCTAC
CACACCGACA CCCTGGAAAA GGTGATCTGG GCCTACGACC TGGGCGCGGA TGGGAGCCTC
TCCAACAAGC GCGAGTTCTT CCGCCTCGAG ATCGCCGACG CCTGGCCCGA CGGCTCGGTG
GTCGACAGCG AGGGCTTCGT CTGGACCGCC CTGTGGGGCG GCCACGGCGC GCTGCGGCTG
TCGCCCGCCG GCGAGATCGT CGATCGCGTC ATCCTGCCGG CCATCAACGT CACCAAGCCC
TGCTTCGGCG GCCCCGACCT GAAGACCGTC TATTTCACCT CCGCCCGCAA AGGCCTGAGC
GACGAGCAAC TCGCCGCCTA TCCCCAGTGC GGCGGCCTGT TCGCCCTGCC CGTGGCCGTC
GCGGGCCAGC CCCAATACGA GGTGCGTCTT GACCTCCGCT AA
 
Protein sequence
MPEPICVWDL KATLGEGPIW SAEEQAVWFV DIKGHKVHRF HPASGATASF DAPDQVTFLA 
PHAGGGGFVA GLKSGLHRFD PTTGAFVFLA QIEPPELNNR PNDATVDAEG RLWFGTMHDG
EMTPTGALYR LSADGKPIQQ DEGVCITNGP CASPDGKTFY HTDTLEKVIW AYDLGADGSL
SNKREFFRLE IADAWPDGSV VDSEGFVWTA LWGGHGALRL SPAGEIVDRV ILPAINVTKP
CFGGPDLKTV YFTSARKGLS DEQLAAYPQC GGLFALPVAV AGQPQYEVRL DLR