Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_3956 |
Symbol | |
ID | 5901418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 4285497 |
End bp | 4286177 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 641564477 |
Product | GntR family transcriptional regulator |
Protein accession | YP_001685579 |
Protein GI | 167647916 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 0.374286 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.604582 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGAACC CAGCGCAGCG CAAACCCCTC GCCGACAGCC AGGCCATCCA CGACCAAGTC TACCAGTCCA TCCGCCAGGC GCTGATCACC GGCCGGATCG CGCCGGGGGT GGGGGTCAGC TTGCGCAGCC TGGCCGCCGA GCTGGGCGTG TCGCCGATGC CGGTGCGCGA CGCCGTGCGG CGGCTGGTGG CCGAGCGGGC CCTGGCGATC AATCCGGCCA ACAAGCGCCT GTCGGTGCCG TCGCTGACGG CGGCCCGCCT GGAGCAGCTG TGCCAGGCCC GGCTGTGGAT CGAGCCGGAG CTGGCCGCCC GCGCCGCGCC CCACGCCGAC CCCGCCTTCA TCAAGGCCCT GCACGCCATC GACGCCCGGC TGGACGCGGC CCTCGCGGCC GGCGACGTCG ATGGCTACAT GACCGCCAAC CACGCCTTCC ACTTCGCCAT CTACGCGCGG GCCGGCGCCG AGGTGCTGCT GTCGATGGCC GGCGGGCTGT GGCTGCAGAT CGGACCGTTC ATGCGGGTGG TGTTCGGCCG CGTCGGCACC GGCGGCCTGC CCGCCGACCG CCACGCCGAG GCCATGGACG CCCTCAAGGC CCACGACGCC GAGGCGGCGC GCCGGGCCAT CGCGGCCGAC CTGTCGGAGG GCATGGACAA GATGCGGGCG GCGGTGGAGG CGGGGGGATG A
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Protein sequence | MANPAQRKPL ADSQAIHDQV YQSIRQALIT GRIAPGVGVS LRSLAAELGV SPMPVRDAVR RLVAERALAI NPANKRLSVP SLTAARLEQL CQARLWIEPE LAARAAPHAD PAFIKALHAI DARLDAALAA GDVDGYMTAN HAFHFAIYAR AGAEVLLSMA GGLWLQIGPF MRVVFGRVGT GGLPADRHAE AMDALKAHDA EAARRAIAAD LSEGMDKMRA AVEAGG
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