Gene Caul_3956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3956 
Symbol 
ID5901418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4285497 
End bp4286177 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content75% 
IMG OID641564477 
ProductGntR family transcriptional regulator 
Protein accessionYP_001685579 
Protein GI167647916 
COG category[K] Transcription 
COG ID[COG1802] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.374286 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.604582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACC CAGCGCAGCG CAAACCCCTC GCCGACAGCC AGGCCATCCA CGACCAAGTC 
TACCAGTCCA TCCGCCAGGC GCTGATCACC GGCCGGATCG CGCCGGGGGT GGGGGTCAGC
TTGCGCAGCC TGGCCGCCGA GCTGGGCGTG TCGCCGATGC CGGTGCGCGA CGCCGTGCGG
CGGCTGGTGG CCGAGCGGGC CCTGGCGATC AATCCGGCCA ACAAGCGCCT GTCGGTGCCG
TCGCTGACGG CGGCCCGCCT GGAGCAGCTG TGCCAGGCCC GGCTGTGGAT CGAGCCGGAG
CTGGCCGCCC GCGCCGCGCC CCACGCCGAC CCCGCCTTCA TCAAGGCCCT GCACGCCATC
GACGCCCGGC TGGACGCGGC CCTCGCGGCC GGCGACGTCG ATGGCTACAT GACCGCCAAC
CACGCCTTCC ACTTCGCCAT CTACGCGCGG GCCGGCGCCG AGGTGCTGCT GTCGATGGCC
GGCGGGCTGT GGCTGCAGAT CGGACCGTTC ATGCGGGTGG TGTTCGGCCG CGTCGGCACC
GGCGGCCTGC CCGCCGACCG CCACGCCGAG GCCATGGACG CCCTCAAGGC CCACGACGCC
GAGGCGGCGC GCCGGGCCAT CGCGGCCGAC CTGTCGGAGG GCATGGACAA GATGCGGGCG
GCGGTGGAGG CGGGGGGATG A
 
Protein sequence
MANPAQRKPL ADSQAIHDQV YQSIRQALIT GRIAPGVGVS LRSLAAELGV SPMPVRDAVR 
RLVAERALAI NPANKRLSVP SLTAARLEQL CQARLWIEPE LAARAAPHAD PAFIKALHAI
DARLDAALAA GDVDGYMTAN HAFHFAIYAR AGAEVLLSMA GGLWLQIGPF MRVVFGRVGT
GGLPADRHAE AMDALKAHDA EAARRAIAAD LSEGMDKMRA AVEAGG