Gene Caul_3921 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3921 
Symbol 
ID5901383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4237332 
End bp4239470 
Gene Length2139 bp 
Protein Length712 aa 
Translation table11 
GC content71% 
IMG OID641564442 
Product1A family penicillin-binding protein 
Protein accessionYP_001685544 
Protein GI167647881 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0187238 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGACT GGACGCTTCC GCCCTACCGG TTCGACGACA AGGCGACGGG TTCGGCGCCC 
GCGCGCCCGC CGGAATTTGG GTCCGCGCCG CCGCCGCCTC CCCCCGAGCC GCCCCGCAAG
CCCGAGCCGG AAGAGCCCTT CCGAGCGGAT TTGAAGCACG CCAGGGCCAG GCGCGGCCGC
TGGATCTGGT GGACCCTGGC CGTCGTCGTG CTGCTGGGCT TGGCGACCGC CGCCTCGGGC
GCCGGCTATG TCTGGTGGAA ATACCTGCGC GACACCCCCG CCCTGCCCTC GCGCGAGGCG
CTGTTCGCGG TCAACCGCGC GCCGGGCGTT CGTTTCGAGG ACCGCAACGG CCAGGTGATC
GCCAGTCGCG GCCCGCGCTA CGGCCAGCGC ATCACCCTGG GCGCCGTGCC CAACTATCTG
CCCCTGGCCT TCCTGGCCGC CGAGGACAAG CGGTTCTACA AGCACGGGGC CATCGACCCC
TACGGCATCG CCCGCGCGGC CTGGGTCAAC CACCGCGCCC GCCGCACCGT GCAGGGCGCC
TCGACCCTGA GCCAGCAATT GGCCAAAGGG CTGTTCCTGA CCCCCGACCG CACGGTCAAG
CGCAAGCTGC AGGAAATGCT GATGGCCCAC CGGCTGGAGC AGATCCTCAG CAAGGACGAG
GTGCTGGAGC TCTATCTCAA CCGGGTGTTC TTCGGGGCCA ACACCTTCGG CGTGGACGGG
GCCAGCCGCA CCTATTTCGG CAAGCCGGCC AGCCAGCTGA CCCTGTCGGA GGCGGCCCTG
CTGGCCAGCT TGCCCAAGGC CCCCTCGCGC CTAGCCCTGA CCCGCGATAT GTCCAGCGCC
CTGGCCCGCT CGCGCCTGGT GCTGGCCAAC ATGCGCAAGG AGGGCTGGAT CACCGCCGAG
CAGGAGAGCC GCGCCCTGGA CGACACGCCA AGGCTCTCCC CCATGGCTGT AGCCGACGAG
GGCGACTACG GCTGGGTGCT CGACTACGCC ACCGCCGAGG CCGTGCGCAT CGCCGGCCAG
AACGCCCCCG ACCTGGTGGT GCGCCTGACC ATCGATCCGC GCCTGCAGCA TGTGGGGGTC
CAGACCGTGC GCCAGGCCAT CGCCATCGGC GGCGAGCACG CCGGCGCCCG CCAGGCGGCC
CTGCTGTCGC TGTCGGCCGA CGGGGCGGTG CGGGCCATGG TCGGCGGGAC CGACTATATC
GAGAGCCCGT TCAACCGCGC CGTCCAGGCT CGCCGCCAGC CGGGCTCGAC CTTCAAGCCG
TTCGTCTACG CCGCCGCCCT GGAAAAGGGC GTGCTGCCCA CCGACATCCG CGTCGACGGG
CCGGTGCGGT TCGGCGACTG GAAGCCGGAG AACTACGGCG GCGGCTATCG CGGGCCGATG
ACCGTGCAGG ACGCTCTGGT CAATTCGGTC AACACCATCG CCGTCAAGCT GGCCCAGGAG
GCCGGCGGTC CGGCGATCGG CGACCTGGTC CGCCGCTTCG GGATCACGAC CCTGCCCTCC
AATCCCGACC TGTCGGTGGC GCTGGGGGCC TATGAGGTGA ACCTGCTGCA GCTGACCTCG
GGCTTCCAGG TGTTCCAGCA GGGCGGGATC CGCATCGAGC CCTATGTCAT CGAGAGCATC
AGCACCCAGG ACGGTCGTCC GATCTTCGCC CACACCGTCC CGCCCACGCC GGTCAGCGTC
TACGACGTCG GCAAGGCCAG CATGATGGTC AAGATGATGA AGCGGGTGGT CGAGGTCGGC
ACCGCCCGAC GCGCGGCGTT CGGCCGGCCG GCGGCCGGCA AGACCGGCAC CAGCCAGAAC
TGGCGCGACG CCTGGTTCGT GGGCTTCACC CCCGACTACG TGACCGGGGT CTGGGTCGGC
AACGACGACG ACAAGCCGAT GAACCAGGTG GTCGGCGGCG ACATTCCGGC CAGCATCTGG
CGGCGCTACA TGCTGGCGGC CCACGAGGGC CTGGCGGTCC GGGACTTCCC CTGGCTGCTG
GCCGACCCCG CGCCCCTGTC CACGCCCGAT CCCCGCAACG GCTTCTACGA AACCCTGTCG
GCGGAGTTCG CCCGCGCGGC CTCGGAGCTG GAGCCGGTCG TCGCGCCGGA CGGGGTCCCG
GCCGCCGAAC CCCCGGCGCT GGATCAGTTG CCCTACTAG
 
Protein sequence
MNDWTLPPYR FDDKATGSAP ARPPEFGSAP PPPPPEPPRK PEPEEPFRAD LKHARARRGR 
WIWWTLAVVV LLGLATAASG AGYVWWKYLR DTPALPSREA LFAVNRAPGV RFEDRNGQVI
ASRGPRYGQR ITLGAVPNYL PLAFLAAEDK RFYKHGAIDP YGIARAAWVN HRARRTVQGA
STLSQQLAKG LFLTPDRTVK RKLQEMLMAH RLEQILSKDE VLELYLNRVF FGANTFGVDG
ASRTYFGKPA SQLTLSEAAL LASLPKAPSR LALTRDMSSA LARSRLVLAN MRKEGWITAE
QESRALDDTP RLSPMAVADE GDYGWVLDYA TAEAVRIAGQ NAPDLVVRLT IDPRLQHVGV
QTVRQAIAIG GEHAGARQAA LLSLSADGAV RAMVGGTDYI ESPFNRAVQA RRQPGSTFKP
FVYAAALEKG VLPTDIRVDG PVRFGDWKPE NYGGGYRGPM TVQDALVNSV NTIAVKLAQE
AGGPAIGDLV RRFGITTLPS NPDLSVALGA YEVNLLQLTS GFQVFQQGGI RIEPYVIESI
STQDGRPIFA HTVPPTPVSV YDVGKASMMV KMMKRVVEVG TARRAAFGRP AAGKTGTSQN
WRDAWFVGFT PDYVTGVWVG NDDDKPMNQV VGGDIPASIW RRYMLAAHEG LAVRDFPWLL
ADPAPLSTPD PRNGFYETLS AEFARAASEL EPVVAPDGVP AAEPPALDQL PY