Gene Caul_3888 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3888 
Symbol 
ID5901350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4207650 
End bp4208321 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content67% 
IMG OID641564409 
Producttwo component transcriptional regulator 
Protein accessionYP_001685511 
Protein GI167647848 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.130623 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.799765 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTATTC TGATCATCGA AGACGATCTC GAGGCGGCGG CGGCGATGAG CCACGGCCTG 
ACCGAGGCCG GCTATCAGTG CGTCCACGCC CCCGACGGCG AGGCGGGCCT GACGGCGGCC
GGCAAGGGCG GCTTCGACGT GATGATCGTC GACCGCATGA TGCCCAAGAA GAACGGCGTC
GAGGTGGTCG AGACCCTGCG GCGCGAGGGC GACAACACGC CGGTGCTGTT CCTGTCGGCC
CTGGGCGAGG TGGGCGACCG TGTCGTGGGC TTGAAGGCCG GCGCCGACGA CTATCTGGTC
AAACCCTACG CCTTCCCCGA GCTGATCGCC CGCGTCGAGG CCCTGTCGCG CCGTCGCGAG
ACCGGGGCCG TCGCCACGAC CTTGAAGGTC GGCGAGCTCG AGATGAACCT GATCAACCGC
ACGGTCCACC GCCAGGGCAA GGAGATCGAT CTCCAGCCCC GCGAGTTCCA ACTGCTGGAA
TTCATGATGC GCCACGCCGG CCAGTCGGTG ACCCGCACCA TGCTGTTGGA GAAGGTGTGG
GAATACCACT TCGACCCGCA GACCAACGTC ATCGACGTGC ACATCTCCCG CCTGCGTTCG
AAGATCGACA AGGGCTTCGA CCGGGCCATG CTGCAGACCG TGCGCGGGGC CGGCTACCGG
CTCGATCCGT AG
 
Protein sequence
MRILIIEDDL EAAAAMSHGL TEAGYQCVHA PDGEAGLTAA GKGGFDVMIV DRMMPKKNGV 
EVVETLRREG DNTPVLFLSA LGEVGDRVVG LKAGADDYLV KPYAFPELIA RVEALSRRRE
TGAVATTLKV GELEMNLINR TVHRQGKEID LQPREFQLLE FMMRHAGQSV TRTMLLEKVW
EYHFDPQTNV IDVHISRLRS KIDKGFDRAM LQTVRGAGYR LDP