Gene Caul_3720 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3720 
Symbol 
ID5901176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp4018260 
End bp4019741 
Gene Length1482 bp 
Protein Length493 aa 
Translation table11 
GC content69% 
IMG OID641564231 
Productxanthine dehydrogenase, small subunit 
Protein accessionYP_001685345 
Protein GI167647682 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG4630] Xanthine dehydrogenase, iron-sulfur cluster and FAD-binding subunit A 
TIGRFAM ID[TIGR02963] xanthine dehydrogenase, small subunit 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCCAG GACAACAGCG CGGGGTACGT TTCCTGCTGA ACGGCGAGCC GGTCGAGGCC 
GAGGGCGTCG ATCCCACCCG CACGCTGCTG GAGTATCTAC GCGGCGACCT GCGGCGCACC
GGGACCAAGG AAGGCTGCGC CGAGGGCGAC TGCGGGTCGT GCACGGTGCT GGTCGGCGAA
CTGGACGGCG AGGCGCCAAA TCCGAAGGTC GCCTGGCGCG CCGTGAACAG CTGCATCCAG
TTCGTGCCGA TGCTGGACGG CAAGGCGGTG ATCAGCGTTG AGGGTCTAGC CCCAAAAAAT
GAAAGGGGAG ACACGCCGCA TCCGGTGCAG GCGGCGATGG TCGAGCACCA TGGCTCGCAA
TGCGGCTTCT GCACGCCGGG GTTCATCATG TCGCTATACG GCCGGGCCGT CGCGGCCAAG
GGAACCGACG CGCCGATCGA CGAGGTGCTA GCCGGTAACC TGTGCCGCTG CACTGGCTAT
GGCCCGATCA TCGCGGCGGC CGAGGCGATC CCCGGCGAAG CGGCGCCGGA TGTGGCCGAC
AAGCTGGCGG CCTTGCGTCG CGATGCGGCG TTGAGCCTCG ATTACGCGGA CCCAATCGCC
GGCGTCACCC GTCGCTGGTT CGCGCCACGG AGCGCCGATG CATTGGCCGA GACCTACGCC
GCGCACCCCG ACGCGGTCGT CGTGGCGGGC GCCACCGATG TTGGCCTGTG GGTCACCAAG
TTACGCAAGC CGCTCGAGAC CCTGATCGAC ATCGGCCAGG TGGCCGAGCT GAAGCGGATC
GAGCGCGCCA ACGGCGGCGT GCGGATTGGC GCCGGCGTTC GCTATGTCGA TGCGCTGGAA
ACGCTGAGCG GGCTCTATCC GGATCTCGGG GCGATGATGC GGCGGCTGGG TTCGACCCAG
GTGCGCAACA GCGGCACGAT TGGCGGCAAC ATCGCCAACG GGTCGCCGAT CGGCGACATG
CCGCCGGCCC TGATCGCGGC GGGCGCGACC CTGATCCTGC GCCACTGGAA CGAGCGGCGG
GTCTTGCCGC TGGAGGATTT CTTCATCGCC TATGGCCAGC AGGACCGTCG TCCGGGCGAG
TTCGTCGAGG CGGTGCTGGT TCCCGATCCG GCGCCGGGCG CGCTGTTCAA GGTCTTCAAG
CTGTCCAAGC GTTTCGACCA GGACATCTCG GCGGTGTGCG GGGCGTTCAA CATCCAGATC
GAGGACGAGG TCGTCACCGG CGCGCGCATC GTCTATGGCG GCATGGCCGG CACGCCGAAG
CGGGCCACGG CCTGCGAAGA CGCCCTGGTC GGCCAGCCCT GGAACCGCGC CACGATCCAC
GCGGCCGTCG AGGCCCTGGC CGGCGATTTC ACGCCCCTGA CCGACGCCCG CGCCTCGGCC
GCCTATCGCG CCCTGACCGC CGGCAACATG CTGCGCAAGG TGTTCATCGA GTCGGCCCGA
CCCGACCTGG AGACCCGTGT GTCGGAGGCG GCCCATGGCT GA
 
Protein sequence
MAPGQQRGVR FLLNGEPVEA EGVDPTRTLL EYLRGDLRRT GTKEGCAEGD CGSCTVLVGE 
LDGEAPNPKV AWRAVNSCIQ FVPMLDGKAV ISVEGLAPKN ERGDTPHPVQ AAMVEHHGSQ
CGFCTPGFIM SLYGRAVAAK GTDAPIDEVL AGNLCRCTGY GPIIAAAEAI PGEAAPDVAD
KLAALRRDAA LSLDYADPIA GVTRRWFAPR SADALAETYA AHPDAVVVAG ATDVGLWVTK
LRKPLETLID IGQVAELKRI ERANGGVRIG AGVRYVDALE TLSGLYPDLG AMMRRLGSTQ
VRNSGTIGGN IANGSPIGDM PPALIAAGAT LILRHWNERR VLPLEDFFIA YGQQDRRPGE
FVEAVLVPDP APGALFKVFK LSKRFDQDIS AVCGAFNIQI EDEVVTGARI VYGGMAGTPK
RATACEDALV GQPWNRATIH AAVEALAGDF TPLTDARASA AYRALTAGNM LRKVFIESAR
PDLETRVSEA AHG