| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3669 |
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| Symbol | murD |
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| ID | 5901124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | - |
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| Start bp | 3963749 |
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| End bp | 3965158 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641564180 |
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| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
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| Protein accession | YP_001685294 |
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| Protein GI | 167647631 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.00445508 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.10958 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCCGG TCCGCGGTTT CGAGGGCAAG ACCGTCGCCG TGTTCGGCCT GGGCCGGACG
GGGCTGACGG CCGCGCGCGC GCTGATCGCC GGCGGGGCCA AGGTGGCGCT GTGGGACGAA
AAGCCCGAGA GCCGCCAGGC CGCCGTGGCC GAGGGGCTGA ACGTCGTCGA CCTGACCACC
AGCGACTGGA GCGACTACGC CGCCCTGATG CTGTCGCCGG GCGTGCCGCT GACCCATCCC
AAGCCGCACT GGACGGTGGG CAAGGCCAAG GCGGCCGGGG TCGAGGTGCT GGGCGACATC
GAGCTGTTCG CCCGCACGGT GAACGCCGCG CCCGAGCACA AGAAGCCCAA GATCATCGCC
ATCACCGGCA CCAACGGCAA GTCGACGACG ACGGCCCTGA TCGGCCATCT GTGCCGCCAG
GCCGGGCGCG ACACCCGGGT CGGCGGCAAT ATCGGCGAGG GCGTGCTGGG CCTGGAGGAC
ATGCACGGCG GCGCGGTCTA CGTGCTGGAG CTGTCGTCCT ACCAACTGGA CCTGACCTCC
AGCCTCAAGC CCGACGCCGT GGTGCTGCTG AACATCTCGC CCGACCACCT GGACCGGCAT
GGCGGGATGG ACGGCTATAT CGCCGCCAAG CGCCGGATCT TCCTCAACCA GGGCAAGGGC
GACACGGCGA TCATCGGGGT GGACGATCCC TGGTGCCAGC AGATCTGCAC CGAGATCACC
GCCGCCAACC GCCGCACCAT CTGGCCGATC AGCGCCGGCA AGGCCATGGG GCGCGGCGTC
TACGCCCTGC AGGGCGTGCT GTACGACGCG ACCGGCGAGC GCGTGACCGA GATGGCCGAC
CTGTTGCGGG CCCGCAGCCT GCCAGGCCGT CATAACTGGC AGAACGCCGC GGCCGCCTAC
GCCGCGGCCA AGGCCATCGG CATTCCCGCC CACCAGGCCG TCGACGGCCT GATGAGCTTC
CCGGGCCTGG CCCATCGCAT GGAGACGGTC GGCAAGCTGG GCAAGGTCCG CTTCGTCAAC
GACAGCAAGG CCACCAACGC CGACGCCGCC CGCCAGGCGA TGTCGAGCTA TCCCAAGTTC
TACTGGATCG CGGGCGGCGT GCCCAAGGCC GGCGGCATAG ACGACCTCGT CGACCTGTTC
CCGCGCGTGG CCGGAGCCTA TCTGATCGGC CAGGCGGCCG AGGACTTCGG CAAGACGCTT
GAGGGCAAGG CCCCGGCGCG CCAGTGCGGC GATATCGAGA CCGCTGTCGC CGCCGCCTAT
GCCGACGCCG TCGCCAGCGG GGAGGAGGCG GTCGTCCTGC TTTCGCCGGC CTGCGCCTCG
TTCGACCAGT TCGCCGACTT CGAGCAGCGC GGCGAGGCGT TCCGCGCGGC GGTCAACGGA
TTGGGCAAGC CGGCGGCGAA GCGGGCCTAG
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| Protein sequence | MIPVRGFEGK TVAVFGLGRT GLTAARALIA GGAKVALWDE KPESRQAAVA EGLNVVDLTT
SDWSDYAALM LSPGVPLTHP KPHWTVGKAK AAGVEVLGDI ELFARTVNAA PEHKKPKIIA
ITGTNGKSTT TALIGHLCRQ AGRDTRVGGN IGEGVLGLED MHGGAVYVLE LSSYQLDLTS
SLKPDAVVLL NISPDHLDRH GGMDGYIAAK RRIFLNQGKG DTAIIGVDDP WCQQICTEIT
AANRRTIWPI SAGKAMGRGV YALQGVLYDA TGERVTEMAD LLRARSLPGR HNWQNAAAAY
AAAKAIGIPA HQAVDGLMSF PGLAHRMETV GKLGKVRFVN DSKATNADAA RQAMSSYPKF
YWIAGGVPKA GGIDDLVDLF PRVAGAYLIG QAAEDFGKTL EGKAPARQCG DIETAVAAAY
ADAVASGEEA VVLLSPACAS FDQFADFEQR GEAFRAAVNG LGKPAAKRA
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