Gene Caul_3439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3439 
Symbol 
ID5900894 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3720670 
End bp3721980 
Gene Length1311 bp 
Protein Length436 aa 
Translation table11 
GC content67% 
IMG OID641563945 
Productadenylosuccinate lyase 
Protein accessionYP_001685064 
Protein GI167647401 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR00928] adenylosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGCC GTTATTCCCG CCCCGAAGCC GCCGCCATCT GGTCCAGCCA GACCAAGTAC 
AAGATCTGGT TCGAGATCGA GGCTCACGCC GCCGACGCCA TGGCCGAGAT CGGGGTCATC
CCCAAGCTCG CCGCCGAGAC GATCTGGGAG AAGGGCCGCG ACGCGGTCTG GGATAGCGAC
CGGATCGACG AGATCGAGCG CGTCACCAAG CATGACGTCA TCGCCTTCCT GACCCACGTC
TCGGAGATCG TCGGTCCCGA GGCGCGCTTC CTGCACCAGG GCATGACCAG CTCGGACGTG
CTGGACACCT GCTTCGCCGT GCAGCTGAGC AAGGCCACCG ACCTGCTGCT GGAAGATGTC
GACCTGATCC TGGCCGCGCT GAAGCGCCGG GCGCTGGAAC ACAAGATGAC GGTGTGCGTC
GGCCGCAGCC ACGGCATCCA CGCCGAGCCG ATCACCTTCG GCCTGAAGCT GGCCGGCTAT
TACGCCGAGT TCCAGCGCGC CAAGGAGCGC CTGGCCATGG CCAAGTTCGA GATCGCCACC
TGCGCGATCA GCGGCGCGGT CGGCACCTTC GCCAATGTCG ATCCGCGCGT CGAACAGCAC
GTGGCCGACA AGATGGGCCT GGTGGTCGAG CCGGTCTCGA CCCAGGTGAT CCCGCGCGAC
CGCCACGCGG CCTATTTCTG CGCCCTCGGC GTGGTCGCCT CGTCGGTGGA ACGCCTGGCG
ACCGAGATCC GCCACCTGCA GCGCACCGAG GTGCTGGAGG CCGAGGAGCC GTTCGAGGTG
GGGCAGAAGG GCAGCTCGGC CATGCCGCAC AAGCGCAACC CGATCCTGAC CGAGAACCTG
ACGGGTCTGG CCCGGCTGGT GCGCTCGGCC GTGACGCCCG CCCTGGAGAA CGTCGCCCTC
TGGCACGAGC GCGACATCAG CCACTCGTCG GTCGAGCGCG GCATCGGGCC GGACGCCACC
ATCCACCTCG ACTTCGCCCT GCGCCGCCTG GCCGGGGTGA TCGAGCGCTT CAACATCTAT
CCCGACAACA TGGCCAAGAA TTTGGACAAG CTGGGGGGCC TGGTGTTCTC GCAGCGGGTG
ATGCTGGCCC TGACCCAGAA GGGCGTGTCG CGCGAGGACG CCTATGCCGC CGTGCAGGGC
AATTCGATGA AGGTGTGGCG CGGCGAGGGC CGGTTCATCG ACTTCCTGAA GGCCGATCCG
GTGGTCTCCA AGGCGCTGTC GGACGCCGAG CTCGAGGAGC TGTTCGACTA CGGCTACCAC
ACCAAGAACG TGGACGTGAT CTTCAAGCGG GTGTTCGGCG AGCAGGGCTG A
 
Protein sequence
MISRYSRPEA AAIWSSQTKY KIWFEIEAHA ADAMAEIGVI PKLAAETIWE KGRDAVWDSD 
RIDEIERVTK HDVIAFLTHV SEIVGPEARF LHQGMTSSDV LDTCFAVQLS KATDLLLEDV
DLILAALKRR ALEHKMTVCV GRSHGIHAEP ITFGLKLAGY YAEFQRAKER LAMAKFEIAT
CAISGAVGTF ANVDPRVEQH VADKMGLVVE PVSTQVIPRD RHAAYFCALG VVASSVERLA
TEIRHLQRTE VLEAEEPFEV GQKGSSAMPH KRNPILTENL TGLARLVRSA VTPALENVAL
WHERDISHSS VERGIGPDAT IHLDFALRRL AGVIERFNIY PDNMAKNLDK LGGLVFSQRV
MLALTQKGVS REDAYAAVQG NSMKVWRGEG RFIDFLKADP VVSKALSDAE LEELFDYGYH
TKNVDVIFKR VFGEQG