| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3426 |
|---|
| Symbol | |
|---|
| ID | 5900881 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 3704967 |
|---|
| End bp | 3706190 |
|---|
| Gene Length | 1224 bp |
|---|
| Protein Length | 407 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641563932 |
|---|
| Product | acyl-CoA dehydrogenase domain-containing protein |
|---|
| Protein accession | YP_001685051 |
|---|
| Protein GI | 167647388 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1960] Acyl-CoA dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.751929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.216447 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTCA ACGACTCTCC CGAAGAAGCC GCCTATCGCG AGAAGGCCCG CGCCTGGTTG
GTCGAGGCCG CTGCGGCGCA CCGGGCCGAG CATGGCGACC CCAAGCCCAC CACGCCCGAG
CACATGGCGG CCGGCAAGGC CTGGCAGGCT CGCAAGGCCG CCGGCGGCTA CGCCTGCATC
ACCTGGCCCG CGGCCATCGG CGGCGGCGGC GGCACGCCGA TCCAGTCGGT GATCTTCGGC
CAGGAAGAGG CCAAGGCCGG GGTCGGCTAC GGCTACTTCA CCATCGGCCT AGGCATGTGC
GTGCCAACGG TCATGGCCTT CGCCAATGAC GAGACCAAGC AACGCTTCGT CAGCCCCGCC
GTGAAGGGCG AGGAGATCTG GTGCCAGCTG TTCTCCGAAC CGGCCGGCGG TTCGGACGTC
GCCGCGCTGC GCACCCGCGC CGTCAAGGAC GGTGATGACT GGATCATCAA CGGCCAGAAG
GTCTGGACCA CCGGCGCCCA CTATTGCGAC TACGGCATCG TCCTGGTCCG CACCGATCCC
GACGTGCCCA AGCACAAGGG CCTGACCATG TTCTGGATCG ACATGCGCGA TCCAGCGGTC
GAGTGCCGGC CGATCCACCA GATGTCGGGC GGGCGCGAGT TCAACGAGGT CTATTTCACC
GACCTACGGG TCAAGGACAG CCAGCGCCTG GGCGCGGTCG GCGACGGCTG GAAGGTGGCC
CTGGTCACCC TGATGAACGA GCGCCTGGCG GTCGGCGGCT CCAGCGGTCC GGACTATCGC
CAGGTGATGG AACTGGCCCG CGGGCTTTCC GGGCCGAGCG GCCCGGCCTT GAAGGACAAC
GCCTTCCGCG AGAAGTTGGC CGACTGGTAT GTCAATTCCC AGGGGCTGAA ATACACCCGT
TTCCGGACCA TGACCGCCCT GTCGCGCGGC CAGACGCCGG GACCGGAAAG TTCGATCGGC
AAGATCATCG CCGCCAACCA GATGCAGGAA ATGGCCAACG CCGCCGTCGA GGCCGAGGGC
GAGTACGGCA TCCTGACCGA TCCGGCCTTG GCGCCCATGG AGGCGGCTTT CCAGGCCAGC
CTGATGTGGG CCCCGGGCCT GCGCATCGCC GGCGGCACCG ACGAAATCCT CAAGAACATC
ATCGCCGAAC GGGTCCTGGG CCTGCCCGGC GATGTCCGCG TCGACAAGGA CGTGGCGTTC
AAGGACATGC CAACCGGAGC CTGA
|
|---|
| Protein sequence | MDFNDSPEEA AYREKARAWL VEAAAAHRAE HGDPKPTTPE HMAAGKAWQA RKAAGGYACI
TWPAAIGGGG GTPIQSVIFG QEEAKAGVGY GYFTIGLGMC VPTVMAFAND ETKQRFVSPA
VKGEEIWCQL FSEPAGGSDV AALRTRAVKD GDDWIINGQK VWTTGAHYCD YGIVLVRTDP
DVPKHKGLTM FWIDMRDPAV ECRPIHQMSG GREFNEVYFT DLRVKDSQRL GAVGDGWKVA
LVTLMNERLA VGGSSGPDYR QVMELARGLS GPSGPALKDN AFREKLADWY VNSQGLKYTR
FRTMTALSRG QTPGPESSIG KIIAANQMQE MANAAVEAEG EYGILTDPAL APMEAAFQAS
LMWAPGLRIA GGTDEILKNI IAERVLGLPG DVRVDKDVAF KDMPTGA
|
|---|
| |