| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_3404 |
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| Symbol | |
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| ID | 5900859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | - |
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| Start bp | 3677702 |
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| End bp | 3678697 |
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| Gene Length | 996 bp |
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| Protein Length | 331 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641563910 |
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| Product | D-alanine--D-alanine ligase |
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| Protein accession | YP_001685029 |
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| Protein GI | 167647366 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1181] D-alanine-D-alanine ligase and related ATP-grasp enzymes |
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| TIGRFAM ID | [TIGR01205] D-alanine--D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.115962 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.00803245 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGCGCACCA CCATCCTCTT CGGCGGCACG AGCCGCGAGC GCCTCGTTTC GGTGGCCAGC
GCCAAGGCCC TGGCCACGGC CCTGCCGGAC GCCGACCTGT GGTTCTGGGC GCCGGACGAC
AAGGTCTATG TCGCCAGCGA CGCCGTGCTG CAGGCCCACG CGCGGCCGTT CGAGATCGAC
CTGCCCACAG AAGGGGCGGC GATCGGCGGC ATCGAAGCCG CGCTCGACAA GGCCAAGGCC
GAGGAGCGCG TGCTGGTCCT GGGCATGCAC GGCGGCGCGG CCGAGAACGG CGACCTGGCG
GCCCTGTGCG AGGCGCGCGG CGTGGCCTTC ACCGGTTCGG ACAGCCGGTC CAGTCGCCTG
GCCTTCGACA AGATCGCCAC CAAGGCCGCC GTGGCCAAGG CCGGCGTCGT CGCGCCCTCG
ACGGTCGAGT TGGCCGACGC GGAAGCCGCC CTGGCCAAGT ATGGCAAGCT GGTCGCCAAG
CCGGTGGCCG ACGGCTCCAG CTACGGCCTG ATCTTCGTCA ACGGTCCGGC TGACCTCGAG
ACGCTGGCCG CCGCCGCCGG CCGCGAGGCC TATGTCATCG AGCCGTTCGT GGCGGGCGCC
GAGGCCACCT GCGGGGTGCT GGAGCAGGAC GGCAAGGTCT TCGCCCTGCC GCCGGTCGAG
ATCCGCCCGG CCGACGGCGC GTTCGACTAT GTCGGCAAGT ACCTGTCCAA GACCACGGAG
GAGATCTGCC CGGCCACCTT CGCGCCGGCG GTCAACGCCG CCATGCAGGA GGCCGCGCTG
AAGGCCCACA AGACCGTGGG CGCCGGCGGA TATTCCCGCA GCGACTTCAT CGTCACCCCC
AACGGCCCGA TCTTCCTGGA GATCAACACC TTGCCGGGCA TGACCGCCGC CTCGCTGTAT
CCCAAGTCGC TGAAGGCCCA GGGCATCGCG TTCAAGGACT TCCTGGACGG CCAGATCGCC
CTGGCGGTCG CCCGCGCCAA GGCCGAGGCG GCCTGA
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| Protein sequence | MRTTILFGGT SRERLVSVAS AKALATALPD ADLWFWAPDD KVYVASDAVL QAHARPFEID
LPTEGAAIGG IEAALDKAKA EERVLVLGMH GGAAENGDLA ALCEARGVAF TGSDSRSSRL
AFDKIATKAA VAKAGVVAPS TVELADAEAA LAKYGKLVAK PVADGSSYGL IFVNGPADLE
TLAAAAGREA YVIEPFVAGA EATCGVLEQD GKVFALPPVE IRPADGAFDY VGKYLSKTTE
EICPATFAPA VNAAMQEAAL KAHKTVGAGG YSRSDFIVTP NGPIFLEINT LPGMTAASLY
PKSLKAQGIA FKDFLDGQIA LAVARAKAEA A
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