Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_3341 |
Symbol | |
ID | 5900796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 3620092 |
End bp | 3621000 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641563847 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001684966 |
Protein GI | 167647303 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.662956 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGACG ATATCCGGTT CGACGGTCAG GTGGCGATCG TCACGGGGGC CGGCGGCGGT CTGGGCCGGC AGCATGCGCT GGAACTGGCG CGGCGCGGCG CCAAGGTCGT GGTCAATGAT CTGGGCGGCA GCGTCGATGG CTCGGGCGGC TCGTCCGAAG CGGCCCTGAA CGTGGTCAAG GAAATCGAGG CCCTCGGCGG CGAGGCCATC GCCCACGGCG CCTCGGTGAC CGACGACGCC GGCGTGGCCG ACCTGGTGAA GACCACCATG GAGAAATGGG GCCGGATCGA TATCCTGATC GCCAACGCCG GCATCCTCCG CGACCGCACC CTGACCAAGA TGGAGCTGGC CGACTTCGAA GCCGTGATCC AGGTCCACGT GTTCGGCACC TTCAAGCCGA TCAAGGCCGT GTGGGACATC ATGAAGGCCC AGAACTACGG CCGCATCGTC GTCACCACGT CGTCCTCGGG GATGTACGGC AACTTCGGCC AGTCCAACTA CGGCGCGGCC AAGATGGCGG TGCTGGGCCT GATGAACACG CTGAAGCTGG AAGGCGCCAA GAACAACGTC AAGATCAACG CCATCAGCCC GGTGGCCGCC ACCCGCATGA CCGAGGGCCT GATGCCGCCG GAGGTGCTCG AGAAGCTGAA GCCGGAATAC GTCACCCCCG GCGTGGTCTA TCTGGTGTCG GAAGACGCCC CCACGGGCGC GATCCTGACC GCCGGCGCCG GCGCTTTCGC CCTGTCGCGG ATCTACGAAA CCGAAGGCGC CTATCTGGGC GAAGGCGGGC TGTCGGCCGA GGAAGTTCGC GACAACTGGG AACAGATCAC CGCCGAGCCG GGCCAGAAGG CCTACTTCAA CGGTGGCGAA CAGGGCCAGA AGTTCTTCCG TAAGATGGCG GGCGGCTAG
|
Protein sequence | MADDIRFDGQ VAIVTGAGGG LGRQHALELA RRGAKVVVND LGGSVDGSGG SSEAALNVVK EIEALGGEAI AHGASVTDDA GVADLVKTTM EKWGRIDILI ANAGILRDRT LTKMELADFE AVIQVHVFGT FKPIKAVWDI MKAQNYGRIV VTTSSSGMYG NFGQSNYGAA KMAVLGLMNT LKLEGAKNNV KINAISPVAA TRMTEGLMPP EVLEKLKPEY VTPGVVYLVS EDAPTGAILT AGAGAFALSR IYETEGAYLG EGGLSAEEVR DNWEQITAEP GQKAYFNGGE QGQKFFRKMA GG
|
| |