Gene Caul_3339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_3339 
Symbol 
ID5900794 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp3618134 
End bp3618883 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content69% 
IMG OID641563845 
ProductABC transporter related 
Protein accessionYP_001684964 
Protein GI167647301 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGGCC TCGTCCCCTA CAAGCACGGC GACACCGCCC TGATGGCCAA GGGCCTGGTC 
AAGCGCTTCA AGACCGGGCG GGCCTATATC GAGGTGCTCA AGAGCGTGGA CTTCGACGCC
AAGCACGGCG ACGTGACCAT GGTCATGGGG CCCTCCGGCT CGGGCAAGTC GACCCTGGTG
GCGGCCCTGT CGGGCCTGCT GCGGCCCGAC GAAGGCAAGG TCGCGGCCCT GGACGCCAAG
GACCTATGGA AACTGCCGCC GGGCAAGATC GACAAGTTCC GCCTCGACCA CTGCGGCTTC
ATCTTCCAGG GCTTCAACCT GTTCCCCGCC CTCACCGCCA AGCAGCAGGT GATGACGGCC
CTGAAGTACC AGGGCGTCGG CCCGGGCGAG GCCTCGCGCC GCGCCCAGGC TGCGCTGGAG
GCGGTGGGCC TGGGTCCGCG CGTCAACCAG CGTCCGTCCG AGCTGTCGGG GGGCGAGAAG
CAGCGCGTCG CCATCGCCCG GGCCATGGCC AAGAACCCCA ACCTGATCTT CGCGGATGAG
CCAACCTCCG CTCTTGACGG GAAAAGCGGT CAGATCGTCA TCGGCCTGCT GCGCGCCGCC
GCCACCGAGC GCGGCGCGGC GGTGATCTGC GTCACCCACG ACCCGCGGCT GGAGGCCTAT
GCCGACCGCG TCATCCACAT CGAAGACGGC CGGATCCTGG ACGACGTGCG TAGAACGCCC
GACGCCAATC CCGCGCCGCT CAGCCACTGA
 
Protein sequence
MNGLVPYKHG DTALMAKGLV KRFKTGRAYI EVLKSVDFDA KHGDVTMVMG PSGSGKSTLV 
AALSGLLRPD EGKVAALDAK DLWKLPPGKI DKFRLDHCGF IFQGFNLFPA LTAKQQVMTA
LKYQGVGPGE ASRRAQAALE AVGLGPRVNQ RPSELSGGEK QRVAIARAMA KNPNLIFADE
PTSALDGKSG QIVIGLLRAA ATERGAAVIC VTHDPRLEAY ADRVIHIEDG RILDDVRRTP
DANPAPLSH