Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_3237 |
Symbol | |
ID | 5900692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 3496489 |
End bp | 3497313 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641563742 |
Product | short chain dehydrogenase |
Protein accession | YP_001684862 |
Protein GI | 167647199 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.996911 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAAAA CCTGGTTCAT CACGGGCGCC TCGACGGGCC TGGGACGCAT CATGACCGAG CGCTTGCTTG AGCGTGGCGA CCGGGTCGTC GCGACGGTGC GCCAGCCGCA GGCGTTACAG GAACTTGTCG AACGCCACGG TGATGCGCTC CGCGTCGCGA TCCTGGATCT CACCGAGACC CCGGCCGTGC GCGAGGTCGT CGATCAGGCG TTCGCGGCGA TGGGGCGGAT CGATGTGATC GTCAGCAACG CCGGTTACGG CCTGTTCGGC GCGGCCGAGG AACTGTCCGA TGCTGAGATC GACCGGCAGA TCGCCACGAA CCTGACCGGA TCCATTCAAC TCATCCGGGC CGCATTGCCC CACCTTCGAA CCCAGGGCGG AGGGCGCATC GTCCAGGTGT CTTCCGAAGG CGGGCAGATC GCCTATCCCA ACTTCAGCCT GTACCACGCC ACCAAATGGG GCATCGAGGG TTTCGTCGAG TCGGTTCGGC AGGAGGTCGA GCCGTTCGGC ATCGATTTCC TGATCGTCGA GCCTGGCCCG ACCAAGACCA ATTTCGGCGT TGGTCTGGCC CGCGCCGCGC CCATGCCGGT CTATGACGAC ACGCCAGCGG GCGCCGTGCG CCGCGGCGTG TCGGACGGCA GTTTCGCCAT CAAGGGCGAC GCCGACAAGA CCGTCGCCGC GATGATCATG GCGAGCGACC AGGATCGGCC GCCTCTGCGG TTGGCCCTGG GCGGTTCGGC CTACACTTCC ATCAGCGCCG CGCTGGCGGG GCGTCTCCAG GCAATCGAGG CCCAGCGAGA CCTGGCCTTT TCGGTGGACG CCTGA
|
Protein sequence | MSKTWFITGA STGLGRIMTE RLLERGDRVV ATVRQPQALQ ELVERHGDAL RVAILDLTET PAVREVVDQA FAAMGRIDVI VSNAGYGLFG AAEELSDAEI DRQIATNLTG SIQLIRAALP HLRTQGGGRI VQVSSEGGQI AYPNFSLYHA TKWGIEGFVE SVRQEVEPFG IDFLIVEPGP TKTNFGVGLA RAAPMPVYDD TPAGAVRRGV SDGSFAIKGD ADKTVAAMIM ASDQDRPPLR LALGGSAYTS ISAALAGRLQ AIEAQRDLAF SVDA
|
| |