Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_3080 |
Symbol | |
ID | 5900535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 3340201 |
End bp | 3343338 |
Gene Length | 3138 bp |
Protein Length | 1045 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641563583 |
Product | acriflavin resistance protein |
Protein accession | YP_001684705 |
Protein GI | 167647042 |
COG category | [V] Defense mechanisms |
COG ID | [COG0841] Cation/multidrug efflux pump |
TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.907454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTTCCG ACCTTTCCGT CCGCCGCCCG GTCTTCGCGG CCGTTGTCGC GATCATCCTC TGCGTCATTG GCCTGGCTGC CTTCGGCAGC CTGCCGATCC GGGAACTGCC CAACGTCGAT CCGCCCGTGG TGTCGATTTC GACCAGCTAT ACCGGCGCCT CCGCCGAGGT CATCGAAGAG CGCATCACCC AGGTCATCGA GCGCCAGGTG GCCGGGATCC AGGGCATCGA CCGGGTCAAC AGCTCCTCGC GTGACGGCCG CTCGCAGATC ACCATCACCT TCACTCTGGA CCGCGACCTC GACGCCGCCG CCAACGACGT GCGCGACGCC GTTAGCCGGG TGACCTCGAA CCTGCCCGAC CAGGCCGATC CGCCGCAGAT CGCCAAGGCC CAGGCCGACA GCTCGCCGAT CGTCATCCTC AACCTGACCT CGACGACGCT GTCGCCGCTG GAGCTGGCCG ATTACGCCGA CCGTTATCTG GTCGAGCGGT TGTCGACCGT GCCGGGCGTG GCCCAGGCCG GTCTCAACGG CCAACTCTAC GCCATGCGCA TCTGGCTCAA TCCCGACGCC ATGGCCGCGC GTGGCGTCAC CGTCGACGAC GTCGAGACCG CGCTGAACAA CCAGAACGTC GAACTGCCGG CCGGGGCGCT GGAAAGCGAC GCCAAGGACT TCACCATCCG CGTGGCCCGC AGCTATTCGC GGCCCGAGGA CTTCGTGAAG CTGCCGCTGC GCCCGGCCGA CGCCAATGGC TTCGTGGTCC GCCTGGGCGA CGTGGCGCGT GTGGAGGAAG GCTCCAACGA GCGCCGCAAG ATCTTCCGCG GCAACGGCGT CAATCAGGTC GGCATCTTCC TGACCCGCCA GTCGCAAGCC AACGACGTCG CCATTTCCCG GGTGGTCGAC AAGGAACTTC TGGAAATCAA CAAGACGCTG CCGCCTGGCA CTCAACTGAT AAAGGCCGTC GACAACTCGA TCTTCACCGC CGAGGCGATC CATGAGGTGT GGGTCACCAT GGGCATTTCG ATCGGCCTGG TGGCGCTGGT GAACCTGGTG TTCCTGGGCA GTTGGCGTTC GGCCCTTATC CCGTCGATCA TCGCGCCGAT CTGCATCCTG TCGACCTTCA TCATCCTGGC CCCGCTGGGT TTCTCGCTGA ACCTGCTGAC CCTGCTGGCC CTGGTGCTGG CCGTTGGCCT GGTGGTCGAC GACGCCATCG TGGTGGTCGA GAACATCCAG CGCCGGGTGG ACGAGGGGGA GCCGGCCAAT GTCGCGGCCC TGCGCGGCAC CCGGCAGGTC TTTTTTGCCG TCGTGGCGAC CACCATCGTG CTGATTTCGG TGTTCGCGCC GCTGATGTTC CTGCCTGGCT ATATCGGCCG GTTGTTCGTC GAACTGGCCG TGGCGATCGC GGCCGCCGTG GGGTTCTCGG CTCTGCTGGC GCTAAGCCTG TCGCCGATGC TGGCCTCCAA GCTGCTGAAA CCGGCCAGCG GTGGCAGCTG GTTCAACCGC AAGGTCGACT ATGCGATGGA CAGGCTGAAG GACAGCTATC GTCATTCGCT GGAACGCCTG CTGGCCGCGC GGTCCGCCAG CATCGGCGCA GGCTTGGTGG TGCTGTTCCT GGCCCTGGTG GCCGGGGGGC TGTTCGCGGT CATGCCGCAG GAATTGGTGC CGGCCGAGGA TCGCGGCCGC GTCGACATCG CCATCAACGG ACCCGAGGGG GCGGGCTTCG ACTACACCGC CAGGGCCGCC GCCGCCGTCG AGAAGCAACT GGAGAAATAC CGCGCCGACG GGGTCGCCTC GCGGACCATC ATCGCCGCGC CACGCTTTGG CCAGAACCAG TTCAACACCG CAAACGGCGT GCTGGTGCTC AAGGACTGGG GCGAACGCGA CAAGACCGCC GATCAGGTGG CCGCCGAGCT GAACAAGACC CTCAGCAAGA TCACCGGCGT GCGCGCCGTG GCCAGCGTGC GCGGCGCCTT CCAGCGCGGC GGCGGCGGGG GCGGCGGCAC CAATGTCGAC CTGATCGCCA CCGGAAATGA CTATGTCGAG CTGGCCAACT GGCTGAAGCC GATCCTGGCC GCCTCCCAGG ACAATCCGGG CCTGTCGCGC CCACGCATCG ACTACGAGCC GACCTCGCCG CGCCTGTCCG TGCAGATCGA CCGCGACAAG GCCGCCACCC TGGGCATATC GGCCCAGTCG ATCGGCCGGG TCCTTGAGAC GATGTTCGGC TCGCGCCGGG CCACGACCTA CATCAAGAAC GGCCAGGAAT ACGACGTCAT CCTGCAGTCC AGTCTCGATC AGCGTCGCAG CTTGGCTGAC CTCGACCGGC TCCAGGTGCG CACCCAGTCT GGCGCGCTGG TGCCGCTGTC GACCGTGGTC ACCACGCAGT TGCGCGGTGA CGCCCCCGAC CGTCCGCGTG TCGACCGTCT GCGCTCGGTG ACCCTCACGG CCCAACTGGC GCCCGGCTAC ACGGTTGGCG ATGCGGTGAA GTTCTTCCAG GACCAGGCGG GCGCCAATCC GAGCCCCGGC GTCAGCATCA AGTGGGGCGG TCAGGCCAAG GACTTCCTGG AGGCGTCCGG CGCCGTCGGC ATCGCCTTTG GCTTGGCCCT GCTGCTGGTG TTCCTGGTGT TGGCCGCTCA GTTCGAAAGC TGGATCCATC CGGCCGTGAT TATGCTGACC GTGCCGCTGG CCGCGCTGGG GGGGCTGTTT GGCCTGCTGA TGACCGGTTC GACCATCAAC ACCTATAGCC AGATCGGTCT GATCATCCTG GTCGGCATCG CCGCCAAGAA CGGCATCCTG ATCGTCGAGT TCGCCAATCA ACTGCGCGAC GAGGGCCTGA AGGTGAAGGA GGCGGTGATC GAGGCGGCCG CCCTGCGTTT GCGCCCGATC ATCATGACCT CGATCGCCAC CGCCATGGGC GCCTTGCCCC TGATGTTGTG GACCGGGGCC GGGGCGGGCA GCCGCAAGAC GATCGGGGCG GTGATCTTCA CCGGCGCGAT CTTCTCGACC CTGCTGACGT TGTTCATCGT GCCGGTATTC TACAACCTGC TGGCGCGCTT CACGAAGTCA CCGGAGTGGA CGGCGCGGCA GATCGAAGAG TATGAAGCCC GCGAGAAGAG TGGTGAGGGG CAAGCCTCAC CCGTCTGA
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Protein sequence | MLSDLSVRRP VFAAVVAIIL CVIGLAAFGS LPIRELPNVD PPVVSISTSY TGASAEVIEE RITQVIERQV AGIQGIDRVN SSSRDGRSQI TITFTLDRDL DAAANDVRDA VSRVTSNLPD QADPPQIAKA QADSSPIVIL NLTSTTLSPL ELADYADRYL VERLSTVPGV AQAGLNGQLY AMRIWLNPDA MAARGVTVDD VETALNNQNV ELPAGALESD AKDFTIRVAR SYSRPEDFVK LPLRPADANG FVVRLGDVAR VEEGSNERRK IFRGNGVNQV GIFLTRQSQA NDVAISRVVD KELLEINKTL PPGTQLIKAV DNSIFTAEAI HEVWVTMGIS IGLVALVNLV FLGSWRSALI PSIIAPICIL STFIILAPLG FSLNLLTLLA LVLAVGLVVD DAIVVVENIQ RRVDEGEPAN VAALRGTRQV FFAVVATTIV LISVFAPLMF LPGYIGRLFV ELAVAIAAAV GFSALLALSL SPMLASKLLK PASGGSWFNR KVDYAMDRLK DSYRHSLERL LAARSASIGA GLVVLFLALV AGGLFAVMPQ ELVPAEDRGR VDIAINGPEG AGFDYTARAA AAVEKQLEKY RADGVASRTI IAAPRFGQNQ FNTANGVLVL KDWGERDKTA DQVAAELNKT LSKITGVRAV ASVRGAFQRG GGGGGGTNVD LIATGNDYVE LANWLKPILA ASQDNPGLSR PRIDYEPTSP RLSVQIDRDK AATLGISAQS IGRVLETMFG SRRATTYIKN GQEYDVILQS SLDQRRSLAD LDRLQVRTQS GALVPLSTVV TTQLRGDAPD RPRVDRLRSV TLTAQLAPGY TVGDAVKFFQ DQAGANPSPG VSIKWGGQAK DFLEASGAVG IAFGLALLLV FLVLAAQFES WIHPAVIMLT VPLAALGGLF GLLMTGSTIN TYSQIGLIIL VGIAAKNGIL IVEFANQLRD EGLKVKEAVI EAAALRLRPI IMTSIATAMG ALPLMLWTGA GAGSRKTIGA VIFTGAIFST LLTLFIVPVF YNLLARFTKS PEWTARQIEE YEAREKSGEG QASPV
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