| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2820 |
|---|
| Symbol | |
|---|
| ID | 5900275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 3061842 |
|---|
| End bp | 3063326 |
|---|
| Gene Length | 1485 bp |
|---|
| Protein Length | 494 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641563312 |
|---|
| Product | NADH dehydrogenase subunit M |
|---|
| Protein accession | YP_001684445 |
|---|
| Protein GI | 167646782 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1008] NADH:ubiquinone oxidoreductase subunit 4 (chain M) |
|---|
| TIGRFAM ID | [TIGR01972] proton-translocating NADH-quinone oxidoreductase, chain M |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.22208 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCC TTCTCAGCCT GACCACCTTC GCCCCGCTCG TCGGTGTCGC CGTCCTGCTG
GCCGTTCGCG CCCTCCAGGG CGACAACGCC AAGACCGACA GTCTGGCCAA GTGGATCGCC
CTGGCGACCA CCCTGGTCAC CTTCGCCCTG TCTATCATCC TGGTCGCCAA GTTCGACGCC
AGGAACCCCG GCTTCCAGTT CGTGGAAGAC GCGGCCTGGT TCGCGGGCCT GCACTACCGC
ATGGGCGTGG ATGGCATCTC GGTGCTGTTC GTCCTGCTGA CCGCGTTCCT GCTGCCGATC
TGCGTGATCG CCAGTTGGAA GTCGATCGAC AAGCGGGTCG TGGAATACAT GATCTGCTTC
CTGGTCCTGG AGACCCTGGT GATCGGCGTG TTCTGCGCCC TGGACCTGAT CCTGTTCTAC
CTCTTCTTCG AGGGCGGCCT GGTTCCGATG TTCCTGATCA TCGGCATCTG GGGCGGCAAG
CGCCGGGTCT ACGCAGCCTA CAAGTTCTTC CTCTACACCC TGCTCGGATC GGTGCTGATG
CTGGCGGCCA TCCTGTCGAT GATCGCCATC GCCCGCACCT CGTCGATCCC CGACCTGATG
CACTTCAAGT TCGCCCCGTG GCTTCAGACC TGGCTGTGGC TGGCCTTCTT CGCCAGCTTC
GCGGTCAAGA TGCCGATGTG GCCGGTGCAC ACCTGGCTGC CCGACGCCCA CGTCGAGGCG
CCCACGGCCG GTTCGGTGAT CCTGGCGGGT ATCCTGTTGA AGCTCGGAGG CTACGGCTTC
ATGCGCTTCA GCCTGCCGAT GTTCCCCAAC GCCTCGGAGC TGTTCCAGCC GCTGGTGTTC
GCGATGTCGG CCATCGCCAT CGTCTACACT TCGCTGGTCG CCTTCCGTCA GACCGACATC
AAGAAGCTGA TCGCCTATTC GTCGGTGGCC CACATGGGCT TCGTGACCAT GGGGATCTTC
TCGGGCAACG TCCAAGGCGA GCAGGGCGCG CTGTTCCAGA TGCTAAGCCA CGGGGTGATC
TCAGGCGCGC TCTTCCTCTG CGTCGGCGTG GTCTATGACC GGATGCACAC CCGCGAGATC
GCCTTCTACG GCGGCCTGAC CAACCGCATG CCCTGGTACG CGGCGGTGTT CATGCTGTTC
ACCATGGGCA ATGTCGGCCT GCCGGGCACC TCGGGCTTCG TCGGCGAGAT CCTGACCATG
GTCGGGACCT ACAAGGCCTC GACCTGGACG GCCTTGGTCG CCTCGACCGG CGTGATCCTG
TCGGCGGTCT ACGCCCTGAA CCTGTACCGC CGGGTGATGT TCGGAGAGAT CGTCAATCCC
GAGCTCAAGA CCATCGCCGA CCTCGACAAG CGCGAGATCC TGATCTTCGC GCCGCTGATC
ATCGCCACCC TGGTGCTCGG CGTTTACCCC AATCTCGTGT TCAACCTGAC CGCGTCGTCC
GTCGACGGGC TCGTCGGCGC CTGGCGCGCC GCCGTGGGCG GGTGA
|
|---|
| Protein sequence | MTGLLSLTTF APLVGVAVLL AVRALQGDNA KTDSLAKWIA LATTLVTFAL SIILVAKFDA
RNPGFQFVED AAWFAGLHYR MGVDGISVLF VLLTAFLLPI CVIASWKSID KRVVEYMICF
LVLETLVIGV FCALDLILFY LFFEGGLVPM FLIIGIWGGK RRVYAAYKFF LYTLLGSVLM
LAAILSMIAI ARTSSIPDLM HFKFAPWLQT WLWLAFFASF AVKMPMWPVH TWLPDAHVEA
PTAGSVILAG ILLKLGGYGF MRFSLPMFPN ASELFQPLVF AMSAIAIVYT SLVAFRQTDI
KKLIAYSSVA HMGFVTMGIF SGNVQGEQGA LFQMLSHGVI SGALFLCVGV VYDRMHTREI
AFYGGLTNRM PWYAAVFMLF TMGNVGLPGT SGFVGEILTM VGTYKASTWT ALVASTGVIL
SAVYALNLYR RVMFGEIVNP ELKTIADLDK REILIFAPLI IATLVLGVYP NLVFNLTASS
VDGLVGAWRA AVGG
|
|---|
| |