| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2815 |
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| Symbol | |
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| ID | 5900270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Caulobacter sp. K31 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010338 |
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| Strand | - |
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| Start bp | 3056419 |
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| End bp | 3057144 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641563307 |
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| Product | rhomboid family protein |
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| Protein accession | YP_001684440 |
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| Protein GI | 167646777 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.906786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGACG AGCAGACGCC CGTCTCCGAG GCCCCACGGC GCGAGACGCT GTGGGGCAGG
GGACCGGCGA CGCTCTGGTT CGAGGCTTGG CCGGTCCTGG TGATCACGAT CGTGATCTGG
CTGGTGTTCG CGGGTCAACT CGTCGGCGAG GCGTTCGGAT ATCAGGACGC GATCATCAAC
TATGGCGCCC TCTGGAAGCC TGGGGTCTTC ATGGGCCTGT GGTGGACACC GCTGACCCAC
ATGTTCCTGC ATGCGGGTTG GCTGCACATC GCCATGAACA GCGCCGCTCT CATCGCCTTG
GGTCCGGCTA TCGCTCAACG GCTGGGGCGC GACGGGCTGG GCGGACTGTT ATTCATCGGC
TTTTATCTGG CCTGCGGACT GGCTGGGGCT GGGGCGTTCC TGTTGCTCGC GCCCGAACAG
GTACCCGCGG TCGGCGCTTC CGGGGCGATC TTCGGCCTCT GGGGCGCCGT GGCGCGGTTG
GCCGGCCCCG GCGAGGTCCG CCTGGCCCCG CTCTTCTCCA GCCCGGTGCT ACGGCAGGTC
GGCTCGGCCG TGGTGTCGAA CCTGATCGTC GTCGGCCTGG GCGCGGCTTA TGGCCTTGCC
TCGGGTGTCG GGATCATTGG TATCGCCTGG CAGGCCCACC TCGGTGGTTT CGTGGCCGGG
ATGCTGCTGA TCCAGGTGAC GCCGGTCCGC TTCCACTGGC TGCGCCAAAC CGCGCCGGCG
CTCTGA
|
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| Protein sequence | MSDEQTPVSE APRRETLWGR GPATLWFEAW PVLVITIVIW LVFAGQLVGE AFGYQDAIIN
YGALWKPGVF MGLWWTPLTH MFLHAGWLHI AMNSAALIAL GPAIAQRLGR DGLGGLLFIG
FYLACGLAGA GAFLLLAPEQ VPAVGASGAI FGLWGAVARL AGPGEVRLAP LFSSPVLRQV
GSAVVSNLIV VGLGAAYGLA SGVGIIGIAW QAHLGGFVAG MLLIQVTPVR FHWLRQTAPA
L
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