Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_2799 |
Symbol | |
ID | 5900254 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 3039445 |
End bp | 3040650 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641563291 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_001684424 |
Protein GI | 167646761 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.00337328 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.315561 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAATCCCA ATCCCAAGGT AGGCGCGCGC AAGGTCGTGG TGCTGGGGTC GACCGGCTCC ATCGGCGTTT CGACCCTGGA CCTGTTCGAA CAGGCGGACG TGGCGATCGA GATCCTGGCC CTGACGGCCG GCCGCAATGT CGAGAAGCTG GCCGAGCAGG CCCTGCGCTG GAAGCCCCAG GTCGCCGTCA TCGACGACGA GACCCTCCTG CCGGAGCTGC GCGAGCGTCT GGCCGGATCG GGCGTGCGGG CCGCCGCCGG CCCGGCCGCC GTCTCCGAGG CCGCCGCCAT GGGCGCGGAC TGGGTGATGT CGGCCATCGT TGGCGCGGCC GGCCTGGCCC CGACCCTGGC CGCCGCCCGC ACCGGGGCGG TGATCGCCCT GGCCAACAAG GAAAGCCTGG TCTGCGCCGG CCCGGCCCTG CTGCGCATCG CCCGCGAGGC CGGCGGCTCG GTGATTCCCG TCGATTCCGA GCATTCGGCG ATCTTCCAGG TCCTGCAGGC CGACTGCCTG GACAGGGTTT CGCGGCTGAT CCTGACGGCC TCCGGCGGTC CGTTCCGCAC CTGGGACAAG ACCGCCATGG CCGGAGCCAC GCCGGAACAG GCGGTGGCTC ATCCCAACTG GTCGATGGGC GCCAAGATTT CGGTCGATTC CGCGACGATG ATGAACAAGG GACTCGAGAT GATCGAGGCC TCCTACCTGT TCGACACTTC GCATGAGCGT ATCGACGTCG TGATTCACCC GCAGTCCGTG ATCCACAGCC TGGTCGAGTA CACCGACGGC TCGACCCTGG CCCAGCTGGG GCCGCCGGAC ATGCGCAGCC CGATCTCCTG CGCCTTCGCC TGGCCGCGGC GGCTGTCCTG GCCCGCCAAG TCACTGGATC TGGCCGCCTA CGCCAGCCTG ACCTTCGAGG CGCCGGATCT GGACCGCTTC CCGTCGATCG CCATCGCCCG CGAGGCCCTG CGCCTGGGCG GCGGCGCGCC GGCCGCGATG AACGCCGCCA ACGAGGTGGC GGTCGCGGCC TTCCTTGACC GGCAGATCGG CTTTCTGGAT ATTGCCGGCG CGGTGGCGGG GACACTTGAA CGCATGAACG GCCTCCATGA GCTCGCCGAG AACGACGGCG ACGCCCTCGA CAGCGCGATG ATGACGGACG CTTCGGCCCG CCGCATTGCG GCCGAGGTTG TCAGTCAAGT TCGCCGTCCA AACTGA
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Protein sequence | MNPNPKVGAR KVVVLGSTGS IGVSTLDLFE QADVAIEILA LTAGRNVEKL AEQALRWKPQ VAVIDDETLL PELRERLAGS GVRAAAGPAA VSEAAAMGAD WVMSAIVGAA GLAPTLAAAR TGAVIALANK ESLVCAGPAL LRIAREAGGS VIPVDSEHSA IFQVLQADCL DRVSRLILTA SGGPFRTWDK TAMAGATPEQ AVAHPNWSMG AKISVDSATM MNKGLEMIEA SYLFDTSHER IDVVIHPQSV IHSLVEYTDG STLAQLGPPD MRSPISCAFA WPRRLSWPAK SLDLAAYASL TFEAPDLDRF PSIAIAREAL RLGGGAPAAM NAANEVAVAA FLDRQIGFLD IAGAVAGTLE RMNGLHELAE NDGDALDSAM MTDASARRIA AEVVSQVRRP N
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