Gene Caul_2735 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2735 
Symbol 
ID5900190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2970604 
End bp2972529 
Gene Length1926 bp 
Protein Length641 aa 
Translation table11 
GC content69% 
IMG OID641563227 
ProductTonB-dependent receptor 
Protein accessionYP_001684360 
Protein GI167646697 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG4206] Outer membrane cobalamin receptor protein 
TIGRFAM ID[TIGR01779] TonB-dependent vitamin B12 receptor 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.00964506 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0993289 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCTCGA TTTCCGTCTT GGCCCTGGTG GCCGCCCTTC CCGCCCTCAC CTCGCCCAGC 
CTCGTGCTGG CCGCCGAGAC CGCCGACGCC GCCAACGCGG TCGACCAGGT CGTGGTCACC
GCCGGCCGCG CCGACGACAA GCTGTCGGAA GTCCCCGTCA GCATGACGAT CATCGACGCC
GGCGCGCTGC GTCGCCAGCA GGCGGTCGTC GTGTCCGACC TCCTGTCGCG GACACCCGGC
GTCACCGTCA CCCGCAACGG CGGCGTCGGC GGCTCGACCC AGGTGCGCAT TCGCGGCGCC
GAGACCGACC AGACGGCCGT GCTGATCGAC GGCGTCAAGC TCAACGATCC GTCGGCCACC
GGCGGCGGCT ACAACTTCGC CACCCTGCTG GCCGGCGACG TCGGCCGCAT CGAAGTGCTG
CGCGGTCCCC AGTCCACCCT GTGGGGCAGC CAGGCCATCG GCGGGGTGGT CAACATGATC
ACCGTCACCC CGGACGGCCC GCTGTCGGGC GACGCCACCG TCGAAGGCGG CTCGCGCGCC
ACGGCCTATG CCCGGGTGGG CGTCGGGGCC GGCGGCGACT GGGGCGGCTG GCGGCTGGCG
GCTGGATCCT ACACCACCGC CGGCGTGTCG AACTTCGACC AAGCCATGGG CGGCAAGGAA
AAGGACGGCT ATCACAACAC CTCGGTCAGC GGCCGCCTGG ACCTGAACGT CACCGACGGG
ACCAGCCTCG ATGCGCGCCT GTCCTACGCC TCCGGCCGCA ACGAATTCGA CGGCTTCCCC
GCCCCGCTGT TCGCCTTCGC CGACACCGCC GAATACGGCA AGACCAAGGA GCTGGTCAGC
TATCTGGGCG CGCGCCTGTC CAACTTCGAC GGCGCCCTGA AGAGCCGCGT AGGCTACGCC
TACACCCGGA CCGATCGCGA CAACGACGAC CCCAGCCAGA CTCCGGCCAA GACCTTCGAC
GCGCGCGGCA CCGACAACAG CCTGCAATAC CAAGGTACCT GGACGATCAA TCCGATCTGG
CGCGCGGTGT TCGGCGCTGA GACCGAGCGC TCGTGGTTCC GCACCGCCGC GCCCTCCAGC
TTCGATCCGA ATCCCACGCC CGGCCGTCAC GCGACGGGCA TGGACAGCGT CTACGGCCAG
GTGCAGGCCA AGCCGATCGA GGGCCTGACC CTGACCGGCG GCGTTCGCCA CGATGACCAC
GACACCTTCG GCGGCGCCAC CACCTACCAG GCCGGCGCGG TCTGGACGCC GAACGCGGGG
GCCACCGTCA TCCGCGCCAA CTACGGCGAG GGCTTCAAGG CTCCGTCGCT GTACCAACTG
TACAGCGATT ACGGGAATAC CGGCCTGAAG CCCGAAGAGG CCAAGAGCTG GGACGTCAGC
GTCGAGCACA GTCTGCTGGA GGGCCGGCTG CGCGGCTCAA TCACCTATTT CAACCGCGAC
ACCACCAACC AGATCGACTT CCTGTCGAAC AACACCCCGC CCAATTTCGG CGGCTACGCC
AACACCGCCA AGACCCAAGC GGACGGCGTC GAGGTCGAGG GCAGCTTGGC GGTCAGTTCG
CTGCTGACCC TGTCGGCCAA CTACACCAAC ATGGACGCGA TCAATAAGTC GGCCGGCGCC
AACCACGGCA AGGACCTGGC CCGCCGGGCC GGCGAAACCG CCTCGGCGGA CGCCGAGCTG
ACCCTGCCAT GCGGCCTGAC CGGCGGCGTG ACGATGCAAT ATGTCGGCCA CAGCTTCGAC
AACGCCGCCA ACACCCGCCG GCTGAAAAGC TACGTGCTGA CCGACGTGCG GATCGCCTAT
CCGATCAACG ACACGTTCGA GCTCTACGGC CGGGTCGAGA ACCTGTTCGA CCAGCAATAC
GAGACGATCT ACCGCTACGG CGCCCTGGGT CGCGGCGCCT TCGCCGGCGT TCGGGCCAGG
TTCTAG
 
Protein sequence
MRSISVLALV AALPALTSPS LVLAAETADA ANAVDQVVVT AGRADDKLSE VPVSMTIIDA 
GALRRQQAVV VSDLLSRTPG VTVTRNGGVG GSTQVRIRGA ETDQTAVLID GVKLNDPSAT
GGGYNFATLL AGDVGRIEVL RGPQSTLWGS QAIGGVVNMI TVTPDGPLSG DATVEGGSRA
TAYARVGVGA GGDWGGWRLA AGSYTTAGVS NFDQAMGGKE KDGYHNTSVS GRLDLNVTDG
TSLDARLSYA SGRNEFDGFP APLFAFADTA EYGKTKELVS YLGARLSNFD GALKSRVGYA
YTRTDRDNDD PSQTPAKTFD ARGTDNSLQY QGTWTINPIW RAVFGAETER SWFRTAAPSS
FDPNPTPGRH ATGMDSVYGQ VQAKPIEGLT LTGGVRHDDH DTFGGATTYQ AGAVWTPNAG
ATVIRANYGE GFKAPSLYQL YSDYGNTGLK PEEAKSWDVS VEHSLLEGRL RGSITYFNRD
TTNQIDFLSN NTPPNFGGYA NTAKTQADGV EVEGSLAVSS LLTLSANYTN MDAINKSAGA
NHGKDLARRA GETASADAEL TLPCGLTGGV TMQYVGHSFD NAANTRRLKS YVLTDVRIAY
PINDTFELYG RVENLFDQQY ETIYRYGALG RGAFAGVRAR F