Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_2735 |
Symbol | |
ID | 5900190 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 2970604 |
End bp | 2972529 |
Gene Length | 1926 bp |
Protein Length | 641 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641563227 |
Product | TonB-dependent receptor |
Protein accession | YP_001684360 |
Protein GI | 167646697 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG4206] Outer membrane cobalamin receptor protein |
TIGRFAM ID | [TIGR01779] TonB-dependent vitamin B12 receptor |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.00964506 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.0993289 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCTCGA TTTCCGTCTT GGCCCTGGTG GCCGCCCTTC CCGCCCTCAC CTCGCCCAGC CTCGTGCTGG CCGCCGAGAC CGCCGACGCC GCCAACGCGG TCGACCAGGT CGTGGTCACC GCCGGCCGCG CCGACGACAA GCTGTCGGAA GTCCCCGTCA GCATGACGAT CATCGACGCC GGCGCGCTGC GTCGCCAGCA GGCGGTCGTC GTGTCCGACC TCCTGTCGCG GACACCCGGC GTCACCGTCA CCCGCAACGG CGGCGTCGGC GGCTCGACCC AGGTGCGCAT TCGCGGCGCC GAGACCGACC AGACGGCCGT GCTGATCGAC GGCGTCAAGC TCAACGATCC GTCGGCCACC GGCGGCGGCT ACAACTTCGC CACCCTGCTG GCCGGCGACG TCGGCCGCAT CGAAGTGCTG CGCGGTCCCC AGTCCACCCT GTGGGGCAGC CAGGCCATCG GCGGGGTGGT CAACATGATC ACCGTCACCC CGGACGGCCC GCTGTCGGGC GACGCCACCG TCGAAGGCGG CTCGCGCGCC ACGGCCTATG CCCGGGTGGG CGTCGGGGCC GGCGGCGACT GGGGCGGCTG GCGGCTGGCG GCTGGATCCT ACACCACCGC CGGCGTGTCG AACTTCGACC AAGCCATGGG CGGCAAGGAA AAGGACGGCT ATCACAACAC CTCGGTCAGC GGCCGCCTGG ACCTGAACGT CACCGACGGG ACCAGCCTCG ATGCGCGCCT GTCCTACGCC TCCGGCCGCA ACGAATTCGA CGGCTTCCCC GCCCCGCTGT TCGCCTTCGC CGACACCGCC GAATACGGCA AGACCAAGGA GCTGGTCAGC TATCTGGGCG CGCGCCTGTC CAACTTCGAC GGCGCCCTGA AGAGCCGCGT AGGCTACGCC TACACCCGGA CCGATCGCGA CAACGACGAC CCCAGCCAGA CTCCGGCCAA GACCTTCGAC GCGCGCGGCA CCGACAACAG CCTGCAATAC CAAGGTACCT GGACGATCAA TCCGATCTGG CGCGCGGTGT TCGGCGCTGA GACCGAGCGC TCGTGGTTCC GCACCGCCGC GCCCTCCAGC TTCGATCCGA ATCCCACGCC CGGCCGTCAC GCGACGGGCA TGGACAGCGT CTACGGCCAG GTGCAGGCCA AGCCGATCGA GGGCCTGACC CTGACCGGCG GCGTTCGCCA CGATGACCAC GACACCTTCG GCGGCGCCAC CACCTACCAG GCCGGCGCGG TCTGGACGCC GAACGCGGGG GCCACCGTCA TCCGCGCCAA CTACGGCGAG GGCTTCAAGG CTCCGTCGCT GTACCAACTG TACAGCGATT ACGGGAATAC CGGCCTGAAG CCCGAAGAGG CCAAGAGCTG GGACGTCAGC GTCGAGCACA GTCTGCTGGA GGGCCGGCTG CGCGGCTCAA TCACCTATTT CAACCGCGAC ACCACCAACC AGATCGACTT CCTGTCGAAC AACACCCCGC CCAATTTCGG CGGCTACGCC AACACCGCCA AGACCCAAGC GGACGGCGTC GAGGTCGAGG GCAGCTTGGC GGTCAGTTCG CTGCTGACCC TGTCGGCCAA CTACACCAAC ATGGACGCGA TCAATAAGTC GGCCGGCGCC AACCACGGCA AGGACCTGGC CCGCCGGGCC GGCGAAACCG CCTCGGCGGA CGCCGAGCTG ACCCTGCCAT GCGGCCTGAC CGGCGGCGTG ACGATGCAAT ATGTCGGCCA CAGCTTCGAC AACGCCGCCA ACACCCGCCG GCTGAAAAGC TACGTGCTGA CCGACGTGCG GATCGCCTAT CCGATCAACG ACACGTTCGA GCTCTACGGC CGGGTCGAGA ACCTGTTCGA CCAGCAATAC GAGACGATCT ACCGCTACGG CGCCCTGGGT CGCGGCGCCT TCGCCGGCGT TCGGGCCAGG TTCTAG
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Protein sequence | MRSISVLALV AALPALTSPS LVLAAETADA ANAVDQVVVT AGRADDKLSE VPVSMTIIDA GALRRQQAVV VSDLLSRTPG VTVTRNGGVG GSTQVRIRGA ETDQTAVLID GVKLNDPSAT GGGYNFATLL AGDVGRIEVL RGPQSTLWGS QAIGGVVNMI TVTPDGPLSG DATVEGGSRA TAYARVGVGA GGDWGGWRLA AGSYTTAGVS NFDQAMGGKE KDGYHNTSVS GRLDLNVTDG TSLDARLSYA SGRNEFDGFP APLFAFADTA EYGKTKELVS YLGARLSNFD GALKSRVGYA YTRTDRDNDD PSQTPAKTFD ARGTDNSLQY QGTWTINPIW RAVFGAETER SWFRTAAPSS FDPNPTPGRH ATGMDSVYGQ VQAKPIEGLT LTGGVRHDDH DTFGGATTYQ AGAVWTPNAG ATVIRANYGE GFKAPSLYQL YSDYGNTGLK PEEAKSWDVS VEHSLLEGRL RGSITYFNRD TTNQIDFLSN NTPPNFGGYA NTAKTQADGV EVEGSLAVSS LLTLSANYTN MDAINKSAGA NHGKDLARRA GETASADAEL TLPCGLTGGV TMQYVGHSFD NAANTRRLKS YVLTDVRIAY PINDTFELYG RVENLFDQQY ETIYRYGALG RGAFAGVRAR F
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