Gene Caul_2606 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2606 
Symbol 
ID5900061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2826835 
End bp2828256 
Gene Length1422 bp 
Protein Length473 aa 
Translation table11 
GC content70% 
IMG OID641563097 
Productnitrogen metabolism transcriptional regulator, NtrC, Fis family 
Protein accessionYP_001684231 
Protein GI167646568 
COG category[T] Signal transduction mechanisms 
COG ID[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains 
TIGRFAM ID[TIGR01818] nitrogen regulation protein NR(I) 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCG CCAGCAAGAA GATCCTGATC GCCGACGACG ACAGCTCGGT GCGCCTGGTG 
CTCAGCCAGG CCTTCACCCG ACTGGGCTAT CAGGTGCGGG CGACAGGCAA CGCCACGACC
CTGCTCAAGT GGGTGATGGA CGGCGAGGGC GACCTGGTGG TCACCGACGT GATGATGCCC
GACGAGAACG TCTTCGACGT GCTGCCGCGC ATCCGCAAGG AACGGCCCAA GCTGCCGATC
ATCGTGATGA GCGCCCAGAA CACCCTGCTG ACCGCGGTCA ACGCCGCCGA CGCCGGGGCG
TTCGAATATA TCTCCAAGCC CTTCGATCTG GACGACGTCA CCGCCGCCGC CCGCCGGGCC
CTGTCGCGGC CGGCCGACGC CGAGGCCTCC AAGGCCCAGG CCCGGGCCAT GCGCGACGAG
CGCCTGCCGC TGATCGGCCG CTCGGCTCCG ATGCAGGAGG TCTATCGCAC CATCGCCCGG
CTGGTCGGCG CCGACCTGAC CGTGCTGATC CTCGGCGAGA GCGGCACCGG CAAGGAGTTG
GTGGCCCGCG CCCTGCACGA GCTGGGCCGC CGCCGCGACG GCAAGTTCGT GGTGATCAAC
CTGGCGGCCG TGCCGCGCGA GCGGGTCGAG ACCGAGCTGT TCGGGCGCGG CGAGGGCGAC
CAGGGCCGGC TGATCGAGGC CGACGGCGGC ACGCTGTTCC TCGACGAGAT CGGCGACATG
CCGCTGGATG CCCAGACGCG CCTGCTGCGG GTGATCGACG GCACCGAGCC GGTGCTCAAC
CCCAAGACCG GCCGCCGGCC CAACGTGCGG ATCATCGCCG CCACCAATCG CGATCTGCGC
GGCCTGATCC AGCAAGGCCT GTTCCGCGAA GACCTGTTCT TCCGCCTCAA CGTCGCGCCC
GTGCGCCTGC CGCCGCTGCG CGACCGCACC GAGGACATCC CCGACCTGGC CCGCACCTTC
CTGCTGCGCG CCGCACGCGA GGGGTTGCCG TCCAAGACCA TCGATTCCAG CGCCCTGGAC
CGCATGAAGA CCCATGCCTG GCCGGGCAAT GTGCGTGAGC TGGAGAACCT GATCCGGCGA
ATGTGCGCCC TCTATGCCGA GGAGCTGATC ACCGCCCGCA TCGTCGACCG CGAGTTGCAG
GACCACACCC CCGCCGCCCA TGCCGACGAG GGGCCGGTCA CCCTGGCCAG CCTGGTCGAA
CGTCACCTGT CGTCGCACTT CGCCGACCAG CCGGACGGCG TGCCGGCGGC CGGCCTGTAC
GACCGCGTGC TGCAAGAGGT CGAGCGGCCG CTGATCCAGC TGACCCTGTC GGCGACCCGC
GGCAACCAGG TCCGCGCCGC CGAGATTCTG GGCCTCAACC GCAACACCCT GCGCAAGAAG
ATCCAGGATC TGGGCGTCGA GATGACCCGC GGCCGGCGCT AA
 
Protein sequence
MNAASKKILI ADDDSSVRLV LSQAFTRLGY QVRATGNATT LLKWVMDGEG DLVVTDVMMP 
DENVFDVLPR IRKERPKLPI IVMSAQNTLL TAVNAADAGA FEYISKPFDL DDVTAAARRA
LSRPADAEAS KAQARAMRDE RLPLIGRSAP MQEVYRTIAR LVGADLTVLI LGESGTGKEL
VARALHELGR RRDGKFVVIN LAAVPRERVE TELFGRGEGD QGRLIEADGG TLFLDEIGDM
PLDAQTRLLR VIDGTEPVLN PKTGRRPNVR IIAATNRDLR GLIQQGLFRE DLFFRLNVAP
VRLPPLRDRT EDIPDLARTF LLRAAREGLP SKTIDSSALD RMKTHAWPGN VRELENLIRR
MCALYAEELI TARIVDRELQ DHTPAAHADE GPVTLASLVE RHLSSHFADQ PDGVPAAGLY
DRVLQEVERP LIQLTLSATR GNQVRAAEIL GLNRNTLRKK IQDLGVEMTR GRR