| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2603 |
|---|
| Symbol | ispDF |
|---|
| ID | 5900058 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | - |
|---|
| Start bp | 2823454 |
|---|
| End bp | 2824605 |
|---|
| Gene Length | 1152 bp |
|---|
| Protein Length | 383 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641563094 |
|---|
| Product | bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein |
|---|
| Protein accession | YP_001684228 |
|---|
| Protein GI | 167646565 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[COG1211] 4-diphosphocytidyl-2-methyl-D-erithritol synthase |
|---|
| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
[TIGR00453] 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.328797 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTTCT CCGCCGTCAT CGTCGCCGCC GGTTCCGGAT CTCGCGCAGG CTCCGGCCAG
GCCAAGCAAT GGCGGGTCGT GGCGGGGAAA CCCGTGTTGC GCTGGTCGGT CGAGGCCTTG
TTGAAGGCCG GCGCCCAAAA CCTTGTGATC GTGGCGGATC CCGCCGCTCG CGAGGCCCTG
GAAGACGCCC TCGACGGCCT TTCCGGCTGG ACCACGACGG CGGGCGGCGC GACTCGCGCG
CGCTCCGTCC AGGCCGGATT GGCGGCCTTG ACCGAGCGTC CCGGCGCCGA GCCGGTGCTG
ATCCATGACG CCGCTCGCCC CTTTCTCGGC GCCGCAACAA TCGCCTCGGT GCTGCGCGCC
CTCGACGACG CCGATGGTGC AATTCCAGCC TTGCCGGTGG CCGATACGCT GAAAAGCGGA
GCGCCCGACG CGGCCATTGT CACAAAATCG CGTGACGATC TGTGGCGCGC CCAGACCCCC
CAGGCCTTCC GCCGCGACCG CCTGCTGGCC GCCTACGCCG CCTGGACCGG ACCGGACGAA
CCGACCGACG ACGCCCAGGT GGTCGAGCGC CATGGCGGCC GCGTGGTCGT CACGCCGGGC
GACCCGATGC TGATGAAACT GACCTATCCG GAGGACTTCG CCATGGCTGA ACGACTGGCC
GGCGCGACGC GCGTCACCCG GATGGGCCAG GGCTTCGACG CCCACCGCTG GGGACCCGGC
GAGTCGGTCT GGCTGTGCGG CGTGCAGATC GCCCACGACG AGACCCTGAT CGGCCATTCT
GACGCCGACG CCGGGCTGCA CGCCCTGACC GACGCCATCC TCGGGGCGAT CGGCGAAGGC
GACATCGGCG ACCACTTCCC GCCCACCGAT CCCCAATGGA AGGGCGCGGC GTCCGATAAG
TTCCTGATCC ACGCCGTTGA TCTGGTTCGC CAACGTGGCG GGACCCTGGT CAATGTCGAC
GTGACCCTGA TCTGCGAGCG GCCGAAGATC AAACCGCACC GCGCGGCCAT GCGGCAGCGC
CTGGCCGATA TCCTCGACCT GCCGCTCGAC CGGGTGAGCG TCAAGGCGAC CACCACCGAG
GGCATGGGCT TCACCGGCCG TGGCGAAGGC CTGGCCGCCC AGGCCATCGC CGTGGTCGAG
ACGCCGGCAT GA
|
|---|
| Protein sequence | MTFSAVIVAA GSGSRAGSGQ AKQWRVVAGK PVLRWSVEAL LKAGAQNLVI VADPAAREAL
EDALDGLSGW TTTAGGATRA RSVQAGLAAL TERPGAEPVL IHDAARPFLG AATIASVLRA
LDDADGAIPA LPVADTLKSG APDAAIVTKS RDDLWRAQTP QAFRRDRLLA AYAAWTGPDE
PTDDAQVVER HGGRVVVTPG DPMLMKLTYP EDFAMAERLA GATRVTRMGQ GFDAHRWGPG
ESVWLCGVQI AHDETLIGHS DADAGLHALT DAILGAIGEG DIGDHFPPTD PQWKGAASDK
FLIHAVDLVR QRGGTLVNVD VTLICERPKI KPHRAAMRQR LADILDLPLD RVSVKATTTE
GMGFTGRGEG LAAQAIAVVE TPA
|
|---|
| |