Gene Caul_2573 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2573 
Symbol 
ID5900028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2796315 
End bp2797463 
Gene Length1149 bp 
Protein Length382 aa 
Translation table11 
GC content68% 
IMG OID641563064 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001684198 
Protein GI167646535 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTCG GCGGCCTGGC CCTGGCCGGC GTGGCGTTCG CCATGGTCCA AGGCCCGGCC 
CCGGCCGCCG GCGTGCAGAA GGTCCGCTTC GGCGGCGACC GCAACGAAAC CCGCATCGTC
ATCGACCTCG ACCGCGCCGC CTCGGGCAAG TTGCTGGCCG ATGGCGCGGC GGATCGCCGC
GTGGTGATCG GCCTGCCCAA TGTCAGCGTG TCCGGCGACC TGCAGGGCGC GGGGCAAGGC
CTGGTCGAGC GCTGGTCCAT CGACGAAGCC GCCGGCGGGG CGCGGCTGCG ACTCGACCTG
AAGGCCAACG CCGAGGTTCG TCGGCGATTC CTGCTGCCGC CGGGCGACGG CGCTTCGGCC
TATCGCTATG TCATCGACCT GAAGTCCACC GACGCGCCGG GCGCGGCCCA ATCGCCGTCC
CTGCGCCCGA CCTTGGTCTC GGCCCCGGTC AGGGCGCCGG CCCTGCGCCT GAAGAAGGTT
GTCGTGATCG ATGCTGGTCA CGGCGGAAAG GATCCCGGCT CGTCGGGCGC CAATACCGCA
GAAAAGGACG TCACCCTGGC GGCGGCGAGG GCTTTGAAGG CCAAGCTGGA GAAGTCTGGC
CGCTACACCG TGGTGATGAC CCGCCAGTCA GACACCTTCG TACCGTTGGA AGCGCGGGTG
CAGATCGCCC GCCGGGCCGA CGCCGACCTA TTCATCTCGC TGCACGCCGA TTCGGGTCCT
GACGCGACGA CCCGCGGCGC CAGCGTCTAC ACCCTGTCGG AAAAAGGCAC CGAGCGCGTG
GCGCGGGTGC TTGAGAAAGA CGACTGGTTG ATGAAGGCCA ACATGCCGGG ACGCGACCGC
GCGGTCAGCC AGATCCTGCT GGACCTGTCG CAACGCACCA CCAAGAACCG CTCGGCAGCC
TTCGCCGAAA CCCTTTTGCA AGCGGTGGGC GAGGAGACGA CGCTGCTGCG CCGCAGCCAT
CGCGACGCCG GTTTCATCGT GCTGCTGGCG CCCGACGTCC CGGCTGTTTT GCTGGAAATG
GGCTTCATCA CCAATATCGA CGACGAGCAG TTGCTGAAGA CGTCGGCCGG TCGCGACCGT
CTGATGGACG CCGTGGCCGG CTCGATCGAA TCCTATTTCG CCGCCCAGAC TCGTCTGGCC
GCGCGCTAA
 
Protein sequence
MIVGGLALAG VAFAMVQGPA PAAGVQKVRF GGDRNETRIV IDLDRAASGK LLADGAADRR 
VVIGLPNVSV SGDLQGAGQG LVERWSIDEA AGGARLRLDL KANAEVRRRF LLPPGDGASA
YRYVIDLKST DAPGAAQSPS LRPTLVSAPV RAPALRLKKV VVIDAGHGGK DPGSSGANTA
EKDVTLAAAR ALKAKLEKSG RYTVVMTRQS DTFVPLEARV QIARRADADL FISLHADSGP
DATTRGASVY TLSEKGTERV ARVLEKDDWL MKANMPGRDR AVSQILLDLS QRTTKNRSAA
FAETLLQAVG EETTLLRRSH RDAGFIVLLA PDVPAVLLEM GFITNIDDEQ LLKTSAGRDR
LMDAVAGSIE SYFAAQTRLA AR