Gene Caul_2313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2313 
Symbol 
ID5899768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2515795 
End bp2516373 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content68% 
IMG OID641562804 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001683938 
Protein GI167646275 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGCGG CGACGCCCAC CGACGAAGCG CTCGCGGCGC AGGCCGCGAG GGGTGACGAG 
CGCGCGTTCG CGCAGCTGGT CGGCCGACAC AAGGAAAGTC TCTACCGCCT GCTGCGGCGT
TATACGGGCG ATGCCGATGA GGCCTATGAA GCAGCCCACG AAGCGTTCAT CGCGGCCTGG
GCGGCTTTGG ATCGGTATGA CGCATCGCGC TCCTTCGGCT CCTGGCTGCG CACCATCGCC
ATCAACAAGG CGCGAGACCG CGGGCGGAAG ATGGCCGTGC GCCGCTTCTT TTTCGGGTCC
GTCGCGCCCG ATGACGCCCT GGCCCAAGCC GTCGATCCCG GTGCGCTGGC CGACGACCAG
TTGCGCCAAC ACCAGTCGAT GGGTCTTCTC AACCAGGCGG TGGCGAAACT TCCCGACGCC
CTGAAGGCGC CGCTCGTGCT GACCGCCTTC GAAGGCCTGT CACATCATGA AGCCGCCGCG
ATCCTGGGCG TCTCGCCCAA GTCCGTCGAG ACCCGCGTCT ATCGGGCGCG CAAAGCCCTG
GCGGCGTCGT TGGATCCGGA AGCCTTTCGC GATCGCTAG
 
Protein sequence
MIAATPTDEA LAAQAARGDE RAFAQLVGRH KESLYRLLRR YTGDADEAYE AAHEAFIAAW 
AALDRYDASR SFGSWLRTIA INKARDRGRK MAVRRFFFGS VAPDDALAQA VDPGALADDQ
LRQHQSMGLL NQAVAKLPDA LKAPLVLTAF EGLSHHEAAA ILGVSPKSVE TRVYRARKAL
AASLDPEAFR DR