Gene Caul_2294 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2294 
Symbol 
ID5899749 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2492541 
End bp2493770 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content72% 
IMG OID641562785 
Productouter membrane efflux protein 
Protein accessionYP_001683919 
Protein GI167646256 
COG category[M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACCCC CATACGCCCG GCCCGCCGCC TTGTTCGGCG CGGTCTTGGC CCTCGTGAGC 
CTCGGCGCGC CTGTGCGCGC CGCCGCCGCG CCCGTTACCC TCGCCGCCGC GCTTGAACGC
GCCCAGGCGC AATCTCCGCT GATCACCGCC GCCAGGGCCG CGCTTGCGGC TGAGCAGGGG
CGGGCGCGCC AAGCGGGCTT CTCGCCCAAT CCTGAAGCCA GTCTGCAGAG CGAGAATATC
GCCGGCTCTG GACCCTATGA CGGGTTCGCG TCTGCCGAAA CCACGCTGGC GATCGGCCAG
AGGCTGGAGC TTGGCGGCAA GCGGCGAACC CGGGCTGCGG CCGCCAAGGC CGTGGTCCGC
GCCTATGAAC TTCGCTTAAG CATCGCCCAA GCGGACCTAG CTCAGGAGGT TCGGACCCGA
TACGCCGAAG CGCTGTACGC CGACGCCAGG CTTGCCTTGG CCACCGAAGC AGCCGAGCGG
GCCGAAAGTC TGGCCGGCAT CGCCGCCACC CTAGTCGATG CGGGGCGCGA GCCCCCCCTG
CGCGCCTTGC GCGCCCGCAC CGCCAGTCAG GAAGCGGCCA GCGCCGTGCT AACCGCGCGG
GCGGAGGCGG CCGCGGCCCA TCGGGCGCTG GCGACGCTAT GGTCCGACCC CGAGCCAACG
CTTGAACTGG TCGAACCAGA ACGCCTTGAG CGGCCTGCCA CGCCCGCCGA TCCCACGGCG
GCCTTGGACG TGCGCTTGGC GGACGCTGAG CGTGGAGCCG CCGAGGCCGC AATCGACCGT
GAACGCGCCG CCGGCCGGCC GGACCTCACC GTTCAAGCGG GTGTGAGACG GTTCGAGCAA
ACAGGCGATC AGGCCTTGAT CGTGGGCTTT ACCGCCCCGA TCCCGATCCG TGATCGCAAC
CAGGGCAACG TCGCCGCCGC TCGGGCCGAC GCCACGGCCG CCGAGGCGCG ACAGCGGCTG
GCCTTGGCGC GGGTCGTCCG ATCGGTCCGC GACGCGCAGG CAGCGCTTGC CGCCGCCGAA
GCGCGGCTCG AGGTGTTGCA AGCCAAGACC GTGCCCCAGG CCGAGGAGGC TGTCCGGCTG
TCGCGAGACG GCTTCCAGGC CGGAAAGTTC TCCCTGCTCG ACGTGCTCGA CGCCCAAGGC
GCTCTCTCTG CCGCTCGAAA CGATCTCATC GCCGCGCGCC TGGAGCGCGC CAAGGCGTTG
GCCGCGCTCG AACGCGCCGC CGCTCAATAG
 
Protein sequence
MSPPYARPAA LFGAVLALVS LGAPVRAAAA PVTLAAALER AQAQSPLITA ARAALAAEQG 
RARQAGFSPN PEASLQSENI AGSGPYDGFA SAETTLAIGQ RLELGGKRRT RAAAAKAVVR
AYELRLSIAQ ADLAQEVRTR YAEALYADAR LALATEAAER AESLAGIAAT LVDAGREPPL
RALRARTASQ EAASAVLTAR AEAAAAHRAL ATLWSDPEPT LELVEPERLE RPATPADPTA
ALDVRLADAE RGAAEAAIDR ERAAGRPDLT VQAGVRRFEQ TGDQALIVGF TAPIPIRDRN
QGNVAAARAD ATAAEARQRL ALARVVRSVR DAQAALAAAE ARLEVLQAKT VPQAEEAVRL
SRDGFQAGKF SLLDVLDAQG ALSAARNDLI AARLERAKAL AALERAAAQ