Gene Caul_2268 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_2268 
Symbol 
ID5899723 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp2466388 
End bp2467365 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content70% 
IMG OID641562759 
ProductP-type conjugative transfer ATPase TrbB 
Protein accessionYP_001683893 
Protein GI167646230 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4962] Flp pilus assembly protein, ATPase CpaF 
TIGRFAM ID[TIGR02782] P-type conjugative transfer ATPase TrbB 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGCCTT CCAAGCCAGA TCTGGAGATG TCGCGCAGCC ATCGCATGCT GCGCACGGCC 
TTGGGCCCGC TGTTGCTCGC GCGGCTGGAA GATCCCGGCG TCGCCGAGGT CATGCTCAAC
CCCGACGGCG CGGTCTGGAT CGATCGGTTC GATGTAGGGC TGCGGCCCGC CGACCTGTCG
CTGAGCGCGG CCGACGGCGA GCGGATTATC CGTCTGGTCG CCCACCATGT CGGGGTCGAG
GTCCACGCCG GCCGGCCGCG TCTTGCGGCT GAACTGCCAG GCGGTGGTGA GCGCTTCGAG
GGTCTGCTGC CGCCGCTGGT CTCGGGGCCG ACCTTTTCCC TACGCAAGCC CGCCAGCGTG
GTCTTTCCGC TCGCCGCCTA TGTCGAGCAG GGGGTGATGC GTGCGGAGGA GGCGAGGGCG
CTGGCAAATG CGGTGGTTGA ACGCCGCAAC ATCCTGGTCG TGGGTCCCAC CTCCAGCGGC
AAGACCACGC TAGTCAATGC CTTGCTGGCC GAAGTCGCCG CGCTCGACGA GCGCGTGGTC
CTGATCGAGG ACGTGCGCGA GCTGCAGTGC CCGGCTCGTA ACCTGGTGGC CCTGCGCACC
AAGGAGGGCG TGGCCAGTCT CGCCGACCTG GTGCGCTCCT CCCTGCGCCT GCGGCCCGAC
CGGATCATCA TCGGCGAGGT TCGAGGCGCC GAGGCCCTCG ACCTGATCAA AGCCTGGGGC
ACAGGCCATC CAGGGGGCGT GGCCACCCTG CATGCCGGCT CGGTCCTGGG CGCGCTGCTG
CGCCTGGAAC AGCTGATCCA GGAAGCGGTG GTCACCGTGC CGCGCGCCCT GATCGCCGAA
ACCATCGACC TCGTGGCCGT CATCGCCGGC CGTGGCCGCC AGCGCCGCCT GGTCGATCTG
GTCCGCTTGT GGGGCCTTGG CTCCGACGGC GCCTACCAGC TCAGCCCCGC CTGCCCCCCA
GAAGAGGAGA CTGCCTGA
 
Protein sequence
MEPSKPDLEM SRSHRMLRTA LGPLLLARLE DPGVAEVMLN PDGAVWIDRF DVGLRPADLS 
LSAADGERII RLVAHHVGVE VHAGRPRLAA ELPGGGERFE GLLPPLVSGP TFSLRKPASV
VFPLAAYVEQ GVMRAEEARA LANAVVERRN ILVVGPTSSG KTTLVNALLA EVAALDERVV
LIEDVRELQC PARNLVALRT KEGVASLADL VRSSLRLRPD RIIIGEVRGA EALDLIKAWG
TGHPGGVATL HAGSVLGALL RLEQLIQEAV VTVPRALIAE TIDLVAVIAG RGRQRRLVDL
VRLWGLGSDG AYQLSPACPP EEETA