| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2153 |
|---|
| Symbol | |
|---|
| ID | 5899608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 2334351 |
|---|
| End bp | 2336126 |
|---|
| Gene Length | 1776 bp |
|---|
| Protein Length | 591 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641562643 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_001683779 |
|---|
| Protein GI | 167646116 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0250663 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCAGG CCGCTTCCGC GCCCACCCCC GCCCAAGCCA CCCCCGCCGC CCCGTGGCCC
GCCATGTCGG TGAAACAGGC CTACGCCCTG ATCACCGCCC CCGGTTCGCC CGGCGAGATG
GAGGAGATCG ACATCCGGGG CGTCAAGACC CGGGTCTGGA AGCACTGTCC GCCGACCCTG
CGCGACACCC TGCTGGTGGG CCGCGCGCAC GGTGAGCGGA TCTTCATGGT CCACGAGGAC
GAGCGGGTCA GCTTCGAGGC CTTCTATCGC GCCGTGACGG TGTTCGCGGC CGAGCTGGCC
GCCCAGGGCG TCAAGAAGGG CGACCGGGTC GCCCTGATCA TGCGCAACCT GCCCGAATGG
CCGGTGGCCT TCTATGCCGG CCTGACGCTG GGCGCGATCA TGACCCCCCT GAACGCCTGG
TGGACCGGGC AGGAACTGGA ATACGGCCTG ACCGATTCCG GCGCCTCGGT GGCGATCATG
GATGTCGAGC GCTTCGAGCG CCTGACCGAA CATCTGCACA ACTGCCCCGA GCTGAAGCTG
GTCTATGTCA GCCGTTCGCC GGAGGAGATC GCCCATCCTT ACGTCAAGCA CCTGGAAGCG
GTGATCGGCG CGCCCAACGA CTGGATCAAG CTGGACGAGA AGCCGCTGTC GACCGTCGAG
CTGGGTCCGG AGGACGACGC GACGATCTTC TACACCTCGG GCACCACGGG CAAACCCAAG
GGCGCCCTGG CCACGCACCG GGCCATCAAC AGCAACATCT TCGCCGCCGC CGCCGCCGGC
GCTCGCGGCT TCCTGCGGCG CGGCGAGGTT CCGCCCCAGC CCGATCCGAC CGGTCCCCAG
AAGGGCTCGC TGATCTCGGT GCCGTTCTTC CACGCCACGG GCTGCTTCGC GGTGATGAAC
CCGTCGCTGT TCGCCGGCGC CAAGCTGGCG ATGATCCGCA AGTGGGATCC GGAAAAGGCC
ATGCAGCTGA TCCAGGACGA GAAGCTGACC CAGATGGGCG GGGTGCCGAC CATCGCCTGG
CAGATCATCG AGCATCCCAG CCGCGCCAAC TACGATCTGT CGTCGCTGGA GACCGTGGCC
TATGGCGGCG CGCCCTCGGC GCCGGAACTG GTGCGCAAGA TCAAGGAGAT CTGGCCCAAC
AGCTCGCCCG GCAACGGCTG GGGCATGACC GAGACCTCGG CCACCGCCAC CAGCAATTCG
GGCGAGGACT ATGAGAACCG TCCCGACAGC TGCGGTCCGG CCGTGCCGGT CACCGACCTG
AAGATCATGA CCGTCGAGGC GCCCTACCGC GAGTTGTCGA TCGGCGAGGT CGGCGAGCTG
TGGTGCAAGG GCCCGCAGGT GGTGAAGGGC TACTGGAACA AGCCCGAGGC CACCGCCCAG
ACCTTCATCG ACGGCTGGGT GCGCACCGGC GACCTGGCGC GGCTCGACGA GGAGGGCTTC
TGCTACATCA TCGACCGGGC CAAGGACATG CTGATCCGGG GCGGCGAGAA CATCTACTGC
ATCGAGGTCG AGAACCTGCT GTACGAGCAT CCGGCGGTGA TGGACGCCGC CCTGGTCGGG
ATCGAGCACA AGACCCTGGG CGAGGAGCCG GCCGCCATCG TCACCCTCAA GCCCGGCGCC
AGCGCCACCG AGGCCGAGCT GCGGGCCTTC GTCGCCGACC GCCTGGCCGC CTTCAAGGTG
CCGGTGAAGG TGGTGTTCTG GCCCGAGACC TTGCCGCGCA ACGCCAATGG CAAGATCATG
AAGAACGAGC TGAAGAAGGT GTTCGTCGAG GGGTAG
|
|---|
| Protein sequence | MTQAASAPTP AQATPAAPWP AMSVKQAYAL ITAPGSPGEM EEIDIRGVKT RVWKHCPPTL
RDTLLVGRAH GERIFMVHED ERVSFEAFYR AVTVFAAELA AQGVKKGDRV ALIMRNLPEW
PVAFYAGLTL GAIMTPLNAW WTGQELEYGL TDSGASVAIM DVERFERLTE HLHNCPELKL
VYVSRSPEEI AHPYVKHLEA VIGAPNDWIK LDEKPLSTVE LGPEDDATIF YTSGTTGKPK
GALATHRAIN SNIFAAAAAG ARGFLRRGEV PPQPDPTGPQ KGSLISVPFF HATGCFAVMN
PSLFAGAKLA MIRKWDPEKA MQLIQDEKLT QMGGVPTIAW QIIEHPSRAN YDLSSLETVA
YGGAPSAPEL VRKIKEIWPN SSPGNGWGMT ETSATATSNS GEDYENRPDS CGPAVPVTDL
KIMTVEAPYR ELSIGEVGEL WCKGPQVVKG YWNKPEATAQ TFIDGWVRTG DLARLDEEGF
CYIIDRAKDM LIRGGENIYC IEVENLLYEH PAVMDAALVG IEHKTLGEEP AAIVTLKPGA
SATEAELRAF VADRLAAFKV PVKVVFWPET LPRNANGKIM KNELKKVFVE G
|
|---|
| |