| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caul_2025 |
|---|
| Symbol | |
|---|
| ID | 5899480 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Caulobacter sp. K31 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010338 |
|---|
| Strand | + |
|---|
| Start bp | 2167970 |
|---|
| End bp | 2170006 |
|---|
| Gene Length | 2037 bp |
|---|
| Protein Length | 678 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641562514 |
|---|
| Product | conjugal transfer coupling protein TraG |
|---|
| Protein accession | YP_001683651 |
|---|
| Protein GI | 167645988 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCCA CCAAGCTCCT CATCGGCCAG ATCCTCGCGG TCTTCGCGAT CATGATTCTG
GGCGTCTGGG CCGCCACCCA GTGGGCCGCC GCCATGCTGG GCTACCAAGA CCGCTTGGGC
GCGCCCTGGC TCGAGGTGCT GGGTCAGCCG CTCTACCGGC CCTGGCAGCT TTTCGACTGG
TGGTACCACT ACGAGGCCTA CGCGCCGCTG GTCTTCGACA AGGCCGGGAT GTTGGCGGGC
GCCAGCGGCT TTCTCGGTTG CGCCTGCGCC ATCGTCGGAT CGCTGTGGCG CGCCCGCCAG
ACCGGGCAGG TCACGACCTA TGGATCCTCG CGCTGGGCGA CCCGGTCCGA GGCGGCCGCC
GCTGGCCTGT TCAAGGATGA CGGGGTCTTT CTCGGGCGAC TGGGCGCCGA CTATCTCCGC
CACGCCGGCC CCGAGCATGT CATGGCCTTC GCGCCGACAC GGTCGGGCAA GGGCGTGGGT
CTGGTGGCGC CCAGCCTGCT GTCTTGGACG GGCAGCGCCG TCGTCCACGA CATCAAGGGC
GAGAACTGGA CCCTGACCGC CGGCTGGCGG GCGCGGTTCT CCCATTGCCT GCTGTTCAAT
CCGACCGACG CCCGGTCGGC CCGATACAAT CCACTGCTGG AAGTGCGCAA AGGCCCTGAC
GAGGTCCGCG ACGTTCAGAA TATCGCCGAC GTGCTCGTAG ACCCGGAAGG GGCTTTGGAG
CGCCGATCGC ACTGGGAAAA AACCAGCCAC AGTCTGCTGG TCGGCGCGAT CCTCCACGTC
CTCTACGCCG AGGAGGAAAA GACCCTCGCA CGGGTCGCCA CCTTCCTCTC CGACCCTCAG
CGCTCCTTCG CCCACACGCT GCGCCGGATG ATGGCGACCA ACCATCTGGG CACGCCGCAG
GCGCCCAAGG TTCACCCCGT GGTCGCCAGC GCGGCCCGAG AGGTCCTCAA CAAGGCGGAG
AACGAACGCA GCGGCGTGCT CTCCACCGCC ATGTCGTTCC TCGGGCTCTA TCGGGACCCG
ACCGTCGCCC TGACGACTTC GGCCTGTGAC TGGCGGATCG CCGATCTCGT CGACGCCCCG
TCGCCGGTCA CCCTCTATCT GGTCATCCCG CCGTCCGACA TCTCGCGGAC CAAGCCCCTG
GTGCGTCTGG TGCTCAACCA GATTGGCCGC CGTCTGACCG AGCGTCTGGA GGGCGATCCG
AAGAAGAGCC GCAAACACCA GCTGCTGATG ATGCTCGACG AGTTCCCGGC CCTGGGACGG
TTGGACTTCT TCGAGACGGC CCTGGCCTTC ATGGCCGGCT ACGGCATCCG CGCTTACCTG
ATCGCCCAGT CCCTCAACCA GATTTCCAAG GCCTACGGCG AGAACAACGC GATCCTGGAC
AATTGCCATG TCCGGATCGC GTTCTCCTCC AACGACGAGC GCACGGCCAA GCGAATCTCC
GACGCCCTGG GCACGGCGAC CGAGCAAAGA GCGCAGCGCA ACTACGCTGG CCACCGGCTC
TCACCCTGGC TCAGCCACGT CATGGTCAGC CGCCAGGAAA CGGCCCGGCC GCTGCTGACC
CCAGGCGAGG TCATGCAGTT GCCGCCCGAC GACGCCCTGG TGCTGGTCTC GGGCCTGGCG
CCGATCCGCG CCAAGAAGCT GCGCTACTAC GAGGACCGCA ATTTCACCGG TCGCGTGGCG
CCGCCGCCGG CGCTTGTGGA CGGCCCCTAT CCCGACTGCC CGCCCTCGCG CGGTGACGAC
TGGGGCGGCC AGGTGCGCGG GCCCCATGCC GGCCTGGCCG CCGACGACGA TGCGCTCGAC
GCCGAAACCG ATGGCGGCCT GCAGCAGGAG CGTCATCCCG GGTTGTTCGA CGAGGTCGTC
GCCCAAGCGC CCGCCGACGA GACCGAACTC GGGCTGGGTC TGGCTGATGA CGACGGCGAC
TTGGTCGCCG ACCGCCAGGC CGTTGATCGC GCCCGCATGG GCCAGGCCGT CACCCGCGCC
CACGCCATGA ACGAGGGGAG CGATCGCGGC GACAACGACC TCCTCCCGGC GTTCTGA
|
|---|
| Protein sequence | MTPTKLLIGQ ILAVFAIMIL GVWAATQWAA AMLGYQDRLG APWLEVLGQP LYRPWQLFDW
WYHYEAYAPL VFDKAGMLAG ASGFLGCACA IVGSLWRARQ TGQVTTYGSS RWATRSEAAA
AGLFKDDGVF LGRLGADYLR HAGPEHVMAF APTRSGKGVG LVAPSLLSWT GSAVVHDIKG
ENWTLTAGWR ARFSHCLLFN PTDARSARYN PLLEVRKGPD EVRDVQNIAD VLVDPEGALE
RRSHWEKTSH SLLVGAILHV LYAEEEKTLA RVATFLSDPQ RSFAHTLRRM MATNHLGTPQ
APKVHPVVAS AAREVLNKAE NERSGVLSTA MSFLGLYRDP TVALTTSACD WRIADLVDAP
SPVTLYLVIP PSDISRTKPL VRLVLNQIGR RLTERLEGDP KKSRKHQLLM MLDEFPALGR
LDFFETALAF MAGYGIRAYL IAQSLNQISK AYGENNAILD NCHVRIAFSS NDERTAKRIS
DALGTATEQR AQRNYAGHRL SPWLSHVMVS RQETARPLLT PGEVMQLPPD DALVLVSGLA
PIRAKKLRYY EDRNFTGRVA PPPALVDGPY PDCPPSRGDD WGGQVRGPHA GLAADDDALD
AETDGGLQQE RHPGLFDEVV AQAPADETEL GLGLADDDGD LVADRQAVDR ARMGQAVTRA
HAMNEGSDRG DNDLLPAF
|
|---|
| |