Gene Caul_1772 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1772 
Symbol 
ID5899227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1872591 
End bp1874033 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content68% 
IMG OID641562262 
ProductAlpha,alpha-trehalose-phosphate synthase (UDP-forming) 
Protein accessionYP_001683399 
Protein GI167645736 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0380] Trehalose-6-phosphate synthase 
TIGRFAM ID[TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.178534 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCGCC TGATCGTGGT CTCCAACCGC GTCAACCCGC CCACGGGCAA GGGCGACGAG 
AGCGTCGGCG GCCTGGCCAT GGCCCTGGCC GCGGCCCTGC GCGAATATTC CGGCATCTGG
TTCGGTTGGA GCGGCAAGAC CACGCCCGAA TTCACCGGCC AGCTCAACAT GCAGAAGGCC
GACGGGGTCA CGGTGGCGAC CGTCGACCTC GAGGAGGGCG ACTACCAGGA ATATTACAAC
GGCTACGCCA ACAAGACCCT GTGGCCGCTG TTCCACTATC GCGTCGACCT GACCGCCTAC
GACCGCTCGT TCGGCGAGGG CTACGACCGG GTCAACAAAC GGTTCGCCGA GACCCTGCTG
CCGTTGATCG AGCCCGACGA CGTGATCTGG GTGCACGACT ATCACCTGAT CCCGATGGCC
CGCGAGCTGC GGCGGCTGGG CGTGACCAAC CGCATCGGCT TCTTCCTGCA CATCCCCTGG
CCGGCCCATC AGCTGGTGGT GACCCTGCCG CGCCACCGGC CGCTGGTCGA GGCGATGTTC
CACTACGACC TGATCGGCTT CCAGACCGAG GAAAGCGTCC AGGCCTTCGA GGGCTACGTG
TTCAACGAGG TCGGCGGCGA GCGCACCGAG GACGGGCGGC TGACCGCCTT CGGCCAGACC
ACCCAGGCCG GGGCCTTCCC GATCGGCATC GACGCCGACG AGTTCGCGCG CATCGCCGAC
AGCCCCCGCG CTCACCGGGT CTACGACCGG CTGATGGCCC ACAGCGTGTT CCGCAAGATG
GTCGTGGGCG TCGACCGCCT CGACTATTCC AAGGGACTGG AAGAGCGGCT GATCGGCTTC
GAGAAGTTCC TGCACGACAA CCCTCAGGCC CGTCGCGAGG TGATGCTGCT GCAGATCGCC
CCGTTGTCGC GCGACGAGGT CGAGGCCTAC CAGGACCTGC GCGCGCGGCT GGACGGGTTG
ATCGGCCATA TCAACGGCGC CTATGCCGAC ATGGACTACA ACCCGATCCG CTACCTGAAC
CGCAGCTATC GCCGCGACGA ACTGGCCGGG GTGTATCGCG CCTCGAAGGC CGCCCTGGTC
ACGCCGCTGC GCGACGGCAT GAACCTGGTG GCCAAGGAGT ATGTCGCCGC GCAAAACCCC
GACGACCCCG GGGTGCTGAT CCTGTCGCGC TTCGCCGGCG CCGCGCGGCA GCTGAAGGAG
GCGTTGATCA TCAATCCCAA CAGCCCCGAA GAGATCTCGG ACGCCCTGAC CCGGGCCCTG
AGCATGGACC TGACCGACCG CAAGCGGCGC TGGGAGGCCC TGATGGACAA CGTCACGCGC
TGCGACGTCA CAGCTTGGCG CGACGACTTC GTGGCCCAGC TGCGCGAGCC TTCGGCGGCC
CAGCCCAAGC CCGCGCTCAA GGCGCCGCCC GCCCTGACGG TTCAGGCCGG AGGGAGGTGC
TAG
 
Protein sequence
MSRLIVVSNR VNPPTGKGDE SVGGLAMALA AALREYSGIW FGWSGKTTPE FTGQLNMQKA 
DGVTVATVDL EEGDYQEYYN GYANKTLWPL FHYRVDLTAY DRSFGEGYDR VNKRFAETLL
PLIEPDDVIW VHDYHLIPMA RELRRLGVTN RIGFFLHIPW PAHQLVVTLP RHRPLVEAMF
HYDLIGFQTE ESVQAFEGYV FNEVGGERTE DGRLTAFGQT TQAGAFPIGI DADEFARIAD
SPRAHRVYDR LMAHSVFRKM VVGVDRLDYS KGLEERLIGF EKFLHDNPQA RREVMLLQIA
PLSRDEVEAY QDLRARLDGL IGHINGAYAD MDYNPIRYLN RSYRRDELAG VYRASKAALV
TPLRDGMNLV AKEYVAAQNP DDPGVLILSR FAGAARQLKE ALIINPNSPE EISDALTRAL
SMDLTDRKRR WEALMDNVTR CDVTAWRDDF VAQLREPSAA QPKPALKAPP ALTVQAGGRC