Gene Caul_1771 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1771 
Symbol 
ID5899226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1871806 
End bp1872594 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content74% 
IMG OID641562261 
ProductHAD family hydrolase 
Protein accessionYP_001683398 
Protein GI167645735 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1877] Trehalose-6-phosphatase 
TIGRFAM ID[TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.165933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCGT TCGGGTCAGC CGTTCGGCAT GCGCCGACGG ACTTGCCGCC ACCCCCAGCC 
GTCTTGCCGC CCCGCGCGGC CCTGTTTCTC GATCTCGATG GAACGCTCGC CCCCATCATG
CCCCGGCCCG AGCAGGTCGG CCCCGACGCA CGTCGCGCGG CGCTGCTCGA CGACCTGTCA
CGGGCGCTGG ACGGCCGGGT GGCCGTGGTC AGCGGGCGCG CGATGGAAGA CCTCGACCGC
ATCCTGGAAA GCCGCGTGAG GGCCGTCGCC GCCGTCCACG GCCTGGTGCG ACGCGGCGCC
CACGGCGTCG ATCGCGCCCA GCCGCACGCC GACCTGGAAC ACGCGCGTGT CGTGCTGCGC
GACCTGGCGC GGGGCGACAA GGGTCTGCTG TTCGAGGACA AGACCCTCAG CGTCGCCTTG
CACTACCGCA ATGTTCCCTC GGCCGCCGAG GCGGTGATCG AGGCCGCCGA GCGGCTGGCG
CGGTCGTCGG ACCTGGTGCT CCAGCTGGGC GACATGGTCG CCGAGCTGCG CACGCCGGGC
CAGGACAAGG GCAAGTCGGT CTCGGCCTTC CTGCGCGAGG CCCCGTTCGA CGGCGCGACG
CCGGTGTTCG TCGGCGACGA CCTGACCGAC GAGGACGGCT TCGCCGCCGC CGCCCGCCTC
GGCGGCTTCG GCGTGCTGGT CGGCCCCGAG CGTCCCACCC AGGCGGCCTA TCGCCTGGCC
GACTGCGACG CCGTGCTCGA CTGGCTGGGC GCTGGCCTGA AGGGACTTGG CGGGAGGAGC
GCCGCATGA
 
Protein sequence
MTAFGSAVRH APTDLPPPPA VLPPRAALFL DLDGTLAPIM PRPEQVGPDA RRAALLDDLS 
RALDGRVAVV SGRAMEDLDR ILESRVRAVA AVHGLVRRGA HGVDRAQPHA DLEHARVVLR
DLARGDKGLL FEDKTLSVAL HYRNVPSAAE AVIEAAERLA RSSDLVLQLG DMVAELRTPG
QDKGKSVSAF LREAPFDGAT PVFVGDDLTD EDGFAAAARL GGFGVLVGPE RPTQAAYRLA
DCDAVLDWLG AGLKGLGGRS AA