Gene Caul_1679 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1679 
Symbol 
ID5899134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1767193 
End bp1768422 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content68% 
IMG OID641562169 
Productpermease YjgP/YjgQ family protein 
Protein accessionYP_001683306 
Protein GI167645643 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.164561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.58926 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAAAC CCATCCCTAT TCCGCACGGC TCCGGGCGCT TTCGCCTGAT CGACGCCTAT 
CTGCTGCGCC TGCTGGTCTG GCCGATCGTC GGCTGCCTGG GCGTGACGGT GATCGCCCTG
CTGCTGGAGC GGGTCTTGCG CCTGCTGGAC GTGCTGTCGC AGAGCAGCGC TCGCTTTGGC
TATGTCACCT CGCTGGCCGC CAATCTGGTG CCGCACTATC TGGGCCTGGC CCTGCCGGTG
GCCTTCTTCG TGGCGCTGTT CATCGTCATC ACCAAGCTCA GCGACGGCTC GGAGATCGAC
GCCCTGCTGG CCAGCGGCCA GTCCCTGACC CGCATCGCCG CGCCGTTCGT CTCTGTCGGC
GTGTTCCTGA TGGTCTTCAG CCTGATCGTC TTCGGGTACA TGCAGCCCTA CAGCCGCTAC
GCCTATCGCG CCGTGATGCA CGAGGCGATC AACGCCGGCT GGAACGGCAA GCTCAACGGC
GGGTCGTTCA TCGACGAGCC CAAGCTGCTG ATGACCGCCG ACGACGCGGA CGCCGCCGGC
CAGCAGTTGA AGCGGGTGTT CATCCGCCGT CTCGACGTCA ATGGCAACGA GGAGGTGATC
ACCGCCGCCA CCGCCGATCT GCGGGCCGAC CATGACGCCA AGTCCGTCAC CATGCTGCTG
CGCAACGGCC AGCGGATCGG GGTCGACGCC CGCGGCGCCT ATCGCACCCT GATGTTCGAC
CAGTTGACCA CCCAGGTTCC CCTGGCCGGC GCCGCCGCCC TGTTGCGGGC GCGCGGCGGC
GACGAGCGCG AACTGACCCT GGGCGAGCTG GCGAGGCAGG CCAATACGCC CAACTCGGTC
GTGCCGCGCG CCACCCTGCT GGCCGAGCTC TACGGACGGC TGGCCCGGGC GCTGTTCCTG
CCCTTCCTGC CGCTGCTGGC CTTCCCGCTC GGTCTGGCGG CCAAGCGCGG CAACCGCACG
CCCGGCCTGA TCATCGCCGG CGTCCTGCTA TTGGCCTTCC AGCACAGCCT GCAGCTGGGT
CAGAGTCTGG CGGAATCCGG CAAGGCCATG CCCCTGGCGG CGATCGGGAC GCCGTGGCTG
ATCTTCACCG GTCTCAGCCT CTGGATGTTC ATCGGCAGCC GCAAGCGGCC CGGCCAGACC
CCGGTCACCG AGATGATCCG GCGGTTCGGG ATCGGCATCA AGCGCTTCCG CCGCATGTTC
CGGGACAAGT TCGAGCAGGC CGAGGCATGA
 
Protein sequence
MKKPIPIPHG SGRFRLIDAY LLRLLVWPIV GCLGVTVIAL LLERVLRLLD VLSQSSARFG 
YVTSLAANLV PHYLGLALPV AFFVALFIVI TKLSDGSEID ALLASGQSLT RIAAPFVSVG
VFLMVFSLIV FGYMQPYSRY AYRAVMHEAI NAGWNGKLNG GSFIDEPKLL MTADDADAAG
QQLKRVFIRR LDVNGNEEVI TAATADLRAD HDAKSVTMLL RNGQRIGVDA RGAYRTLMFD
QLTTQVPLAG AAALLRARGG DERELTLGEL ARQANTPNSV VPRATLLAEL YGRLARALFL
PFLPLLAFPL GLAAKRGNRT PGLIIAGVLL LAFQHSLQLG QSLAESGKAM PLAAIGTPWL
IFTGLSLWMF IGSRKRPGQT PVTEMIRRFG IGIKRFRRMF RDKFEQAEA