Gene Caul_1678 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1678 
Symbol 
ID5899133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1766132 
End bp1767196 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content71% 
IMG OID641562168 
Productpermease YjgP/YjgQ family protein 
Protein accessionYP_001683305 
Protein GI167645642 
COG category[R] General function prediction only 
COG ID[COG0795] Predicted permeases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.936868 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.549476 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGATCC AGCTCTACGT CCTGCGAACG GTCGGCACGC GCGTGCTCGG CGCCGGCCTG 
ATCCTGTTCT CGATCCTGCA GATCCTCGAC CTGCTGGAAG TGACCACCGA CATCATCGAC
AGAGGCCTGG GTACGGCCGG CGTGTTGTAC TACGCCGCCC TGCGTTCGCC GCGCCTGGTC
GAGCAGGTGG CGCCGCTGGC CACCCTGGCC GGCGGCCTGT TTGCTTTCTC CCAGCTGGCC
CGCGAAAACG CGATCATCGC CATGCGCGCC ACCGGGATAT CGGCCTATCG CATCGTGGGC
ATGGCCCTGC CGGTGGTCTT CCTGGTCATG GCCCTGGACT TCAGCTGCGC CCAGATCATC
GCCCCGCGCA CCGATCCCGT GCTGGCCGAC TGGTGGCAGG CCACCACCCC CGCCGCCGAA
CGCAAGGTTC CGGGTCCGCG CAGCTTTCGG GCTGGCGACG ACCTGGTGAT CGCCGCCGGG
GCCTCGGCCG ATGGGGGGAC CCTGAACGCC GTGAAGATCT ATCGCCGCGA CAAGATCGGC
CGGCTGATCG AGCGCATCGA GGCGCCGTCG GCGTCCTACA ACTCCGGCGG CGGCTGGACC
CTGGCCAAGC CGGTGATCGT CCGGTTCAAG GGCGAGCAGG TCAATGTCGT GCCGGCCGCC
CAGTTGAGCT GGCCCTCGCC CCTGCACCGG CAGGACGTGC AGGCCCTGTT CGCCGACAGT
CCCGTCCCCA CCGCCGCCAC CGCTCGCCGC GCCCTGCTGA GCGGTGGCGG CGACCGCCCC
GCCGCCTTCT ACGAAACCCG CTTCCTGTCG GCCTTCGCCG GGCCGTTCGC GGCTCTGGTC
ATGCTGCTGC TGAGCGCGCC CGTCGCCCTG GCCAATTTCC GCAGCGGACA GGGCGCGGGG
CTGCTGGCCG GCGGCCTGGC GGCGGGGCTG CTGTTCCTGG TGGTCAACGG CATGCTCTCG
GCCCTGGGCG AAGGCGGCTC GCTGTCGCCC ATCCTGGCTG TCTGGGGCGG CCCGGTGATC
TTCGCCGCCC TCGCGGTCTA CGCGCTTGTT GTTCTGGAGG GCTGA
 
Protein sequence
MKIQLYVLRT VGTRVLGAGL ILFSILQILD LLEVTTDIID RGLGTAGVLY YAALRSPRLV 
EQVAPLATLA GGLFAFSQLA RENAIIAMRA TGISAYRIVG MALPVVFLVM ALDFSCAQII
APRTDPVLAD WWQATTPAAE RKVPGPRSFR AGDDLVIAAG ASADGGTLNA VKIYRRDKIG
RLIERIEAPS ASYNSGGGWT LAKPVIVRFK GEQVNVVPAA QLSWPSPLHR QDVQALFADS
PVPTAATARR ALLSGGGDRP AAFYETRFLS AFAGPFAALV MLLLSAPVAL ANFRSGQGAG
LLAGGLAAGL LFLVVNGMLS ALGEGGSLSP ILAVWGGPVI FAALAVYALV VLEG