Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_1629 |
Symbol | rplF |
ID | 5899084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 1713232 |
End bp | 1713765 |
Gene Length | 534 bp |
Protein Length | 177 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641562118 |
Product | 50S ribosomal protein L6 |
Protein accession | YP_001683256 |
Protein GI | 167645593 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0097] Ribosomal protein L6P/L9E |
TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 0.415246 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.285193 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCACGGA TCGGTAAGAA AGCCGTCGCG ATCCCCTCGG GCGTGAATAT CACGCTCGAC GGGCAGACCG TCACGGTCAA GGGCCCCAAG GGTCAGCTCT CCTGGACCAT CGCGGAAGAG ATCACCATCA GCCAGGAAGG TTCCGACCTT CTGCTGGTGG CCCGCGATGA CAGCAAGCGC GCCAAGTCGA TGTGGGGTCT GTCCCGCACG CTGGTCGCCA ACATGGTGCA AGGCGTCACC ACCGGCTTCG AGGAAACCCT CGAACTGGTG GGCGTTGGTT ACCGCGCCGC GATGAAGGGC GATGCGCTCT CCATCCAGCT CGGTTTCTCC CACGACGTGA ACGTCGAGGC TCCGGCCGGC GTCACCTTCG CGGTGCCCAA GCAGACCGAA ATCAAGATCG CCGGCGCTGA CAAGCAGGCG GTTGGCGAGA TTGCCGCGAA AATTCGCCGC ATTCGTCCGC CCGAGCCCTA CAAGGGCAAA GGCGTGCGGT ATGCTGGCGA AAAGGTTCGC CGCAAGGAAG GCAAGAAGAA GTAA
|
Protein sequence | MSRIGKKAVA IPSGVNITLD GQTVTVKGPK GQLSWTIAEE ITISQEGSDL LLVARDDSKR AKSMWGLSRT LVANMVQGVT TGFEETLELV GVGYRAAMKG DALSIQLGFS HDVNVEAPAG VTFAVPKQTE IKIAGADKQA VGEIAAKIRR IRPPEPYKGK GVRYAGEKVR RKEGKKK
|
| |