Gene Caul_1629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1629 
SymbolrplF 
ID5899084 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1713232 
End bp1713765 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content63% 
IMG OID641562118 
Product50S ribosomal protein L6 
Protein accessionYP_001683256 
Protein GI167645593 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0097] Ribosomal protein L6P/L9E 
TIGRFAM ID[TIGR03654] ribosomal protein L6, bacterial type 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.415246 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.285193 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACGGA TCGGTAAGAA AGCCGTCGCG ATCCCCTCGG GCGTGAATAT CACGCTCGAC 
GGGCAGACCG TCACGGTCAA GGGCCCCAAG GGTCAGCTCT CCTGGACCAT CGCGGAAGAG
ATCACCATCA GCCAGGAAGG TTCCGACCTT CTGCTGGTGG CCCGCGATGA CAGCAAGCGC
GCCAAGTCGA TGTGGGGTCT GTCCCGCACG CTGGTCGCCA ACATGGTGCA AGGCGTCACC
ACCGGCTTCG AGGAAACCCT CGAACTGGTG GGCGTTGGTT ACCGCGCCGC GATGAAGGGC
GATGCGCTCT CCATCCAGCT CGGTTTCTCC CACGACGTGA ACGTCGAGGC TCCGGCCGGC
GTCACCTTCG CGGTGCCCAA GCAGACCGAA ATCAAGATCG CCGGCGCTGA CAAGCAGGCG
GTTGGCGAGA TTGCCGCGAA AATTCGCCGC ATTCGTCCGC CCGAGCCCTA CAAGGGCAAA
GGCGTGCGGT ATGCTGGCGA AAAGGTTCGC CGCAAGGAAG GCAAGAAGAA GTAA
 
Protein sequence
MSRIGKKAVA IPSGVNITLD GQTVTVKGPK GQLSWTIAEE ITISQEGSDL LLVARDDSKR 
AKSMWGLSRT LVANMVQGVT TGFEETLELV GVGYRAAMKG DALSIQLGFS HDVNVEAPAG
VTFAVPKQTE IKIAGADKQA VGEIAAKIRR IRPPEPYKGK GVRYAGEKVR RKEGKKK