Gene Caul_1472 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1472 
Symbol 
ID5898927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1564159 
End bp1565664 
Gene Length1506 bp 
Protein Length501 aa 
Translation table11 
GC content71% 
IMG OID641561959 
ProductPepSY-associated TM helix domain-containing protein 
Protein accessionYP_001683100 
Protein GI167645437 
COG category[S] Function unknown 
COG ID[COG3182] Uncharacterized iron-regulated membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.150448 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCCG CCGCGCCGCC TCCCCAGCCC ACGAAACTCG CGAAAGCGGA GCCTGCAAAC 
AGCCCGTCGA TCTGGCCCAA GGCTCCGCCG GCCTTCGTGC GCACCGTGCT CTCGGGCCAT
TCCGGCCTGG GCCTGGTCGC CGCCGCCCTG ATCTACATCG TCTGCCTGTC GGGCACGGTG
GCGGTGTTCC TCAACGAGCT GAAGCTGTGG GAAGAGCCCG CCGCGCCCAC GATGACCACG
GCCAACCCCC AGGCCGTCCA GGCCTTCGCC GAGGCCATCA CCAAGACCCA CCCCAAGGCC
GGCGTCGTCT ATATGGGCCT GCCCGCCCCC GACATGCCCC GCCTCTACGC CATGGTCGGC
GAGCGGGTGT TCGTGGCCGA CGCCCAAGGC CGGATCGCCG GCGAGGCCAG CGCGCCCTGG
GCGCATTTCC TCGAGCACCT GCACATCTAT CTGCACCTGC CCGAGACGCT GGGCCTGATC
GTCGTCGGCC TGGTCGGCGC GGCCCTGACC GGCCTGATCG TCTCCGGCTT CCTGGCCCAC
CCGAAGATCT TCCGCGACGC CTTCGCCTTT CGCTGGGCCG GCGCCAAGCG GCTGTCGCGA
GCGGACCTGC ACAACCGCCT CAGCGTCTGG GGCGCGCCCT TCCACTTCGT GGTCGCCTGG
ACCGGGGCCT ATATCGGCCT GGCCACCCTG CTGCTGTTCG CGGTGGCCGG GGTGACGACC
AAGGGCGACA TGGCCAAGGT CACCGCCCCG ATCTACGGCT CGGTTCCCAA GGCCGACCCC
ACGCCCGCGC CTTTCCCCGA CCTGGTCGCG ACCCTGGCCT GGTTCGACGG CAGGCCGGAC
CTGAAGCCCG CCCTGATCTC GCTGACCGCC CTGGGCACCA AGGGCCAGAT GGTCGAGGTC
AATGCGGCCA TGCCCAGGCG GCTGATCTAT GCCGAACGCT ACACCTTCGA CGCTCAGGGC
CGCATGACCC ACAAGCTGGG CCTGTCGGAC GACGGCCTGG GCAAGCAGGT GTTCGCCTCG
TCCTATCCGC TGCACTTCGG CTCGTTCGGC GGCCTGCCGG TCAAGATCGC CTATGGTCTG
CTGGGCGTCG CCCTCTGCGT GGTGACCAGC AGCGGCGTGA CCATCTGGCT GACCCGCCGC
CGCGATCGCG GACGTCCCGC CCCGCGTCTG GAAAAGGCCT GGGCGGCGAT CATCTGGGGC
TCGACCGCGA CCCTGGCCCT GTCGGCGGTC CTTTGGCTGG CGGTGAAGGT CCCGCCGGTC
TGGGCGTTCT GGGCGCCGCT GGCCCTGCTG GTCGTCGCCG CCGTGGCGTT CAAGGACGCA
CGGTTCTGGA CCTTGGGCCT GCGGGTCGCG ACCAGCGTGC TGCTGGCGGC CGTCGTGGCG
GTCCATGCCG GGAAGTTCGG CGGGCGGGCG TTCGACGGCG TGGCGTTGGG GGTGAACCTG
ACGCTGCTGG CCTTGGCTGC ATTAATCGTC CCGTGGCGCA GGCCGCTGGA TCGTCGAGCC
TCCTGA
 
Protein sequence
MDAAAPPPQP TKLAKAEPAN SPSIWPKAPP AFVRTVLSGH SGLGLVAAAL IYIVCLSGTV 
AVFLNELKLW EEPAAPTMTT ANPQAVQAFA EAITKTHPKA GVVYMGLPAP DMPRLYAMVG
ERVFVADAQG RIAGEASAPW AHFLEHLHIY LHLPETLGLI VVGLVGAALT GLIVSGFLAH
PKIFRDAFAF RWAGAKRLSR ADLHNRLSVW GAPFHFVVAW TGAYIGLATL LLFAVAGVTT
KGDMAKVTAP IYGSVPKADP TPAPFPDLVA TLAWFDGRPD LKPALISLTA LGTKGQMVEV
NAAMPRRLIY AERYTFDAQG RMTHKLGLSD DGLGKQVFAS SYPLHFGSFG GLPVKIAYGL
LGVALCVVTS SGVTIWLTRR RDRGRPAPRL EKAWAAIIWG STATLALSAV LWLAVKVPPV
WAFWAPLALL VVAAVAFKDA RFWTLGLRVA TSVLLAAVVA VHAGKFGGRA FDGVALGVNL
TLLALAALIV PWRRPLDRRA S