Gene Caul_1420 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_1420 
Symbol 
ID5898875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1509880 
End bp1511283 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content64% 
IMG OID641561907 
Productmajor facilitator transporter 
Protein accessionYP_001683048 
Protein GI167645385 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGTA TGGGTGCGGC GCAGGCTCCG AATTCCGGAG CGGGCGCCAA GTCAGGGGGA 
GGCGGCCTGA TCCTGGCCGT CGTCTACGTC ACCGCGCTCT TCTTCATCTG GGCGTTCGTC
ACCAATCTGA TCGACCCGCT CGTGAAGAGC ATGAAGGTCA TCTACACGCT CACCGACTTC
GAGACGCAGC TGAACCAGTT CGCGTTCTTC ATCGCCTATG GCGTGATGTC GATCCCGTCG
GCGGGCTATC TGGCCAAGAA CGGCTATGCC AAGTCGATCG TGCTGGGGCT CACCGGCATC
GTCGCCGGTT GTCTGATCGC CTGGTCGACG ACCTTCTCGC ATAACTTCAT CACCGTGCTG
CTGGGCCTGT TCGTGGCCGC CTCGGGCATC ACCCTCCTGC AGGTCGCCGC CAACCCGCTG
ATCGCCTCGA TGGGCAATCC GAAGGGCTCG CACTTCCGCC TCAACCTCTC GCAGGCCTTC
AACTCGATGG GCGCCTATCT GGGCGGCATC TTCGGCGCCG GCTTCCTGCT GAAGGGGCCG
TTGTTCGAGA AGGACGTGGT GATCACCGAG GCCATGAAGA CGACCGGCCT GGGCTTCGTC
ACCAACGTCT ATCTGATGAT CGCGGTGATC CTGGCCTTCT TCACCCTGGC CGTGTTCCTG
GTGCGCAACA CCATCACCCA CCACGCGCCG AAGATGGCCG AGCACTCGGA ATCCCCGTTC
AAGGCGCTGG AGTCCAAGTG GGCCAATCTA GGCGCACTGG GCATCTTCCT CTATGTCGGC
GCCGAGGTCT GCGTGATCTC GGGGATGATC TTCTTCCTCG AACAGAAGCA GATCCTCAAC
GTGCCGTCGC AGGTCGCCGG CTTCGTCGGC CCCATCTTCA TGCTGTTCGC GATGTTCGGC
CGGTTCGGTG GCTCCGTGCT GCTGCGCTAC GTCAAGGCCA CGACCATGCT CGCCGTGGTG
GCCGCCTGCG CCACTGGCCT TTGCGCCCTG GTCATCGCCA CCTACCAGAT GCCGGCTACC
CCGCTGGGCG GCACGGTCCA CCTGCCGGGC GACTTCGTCG CGCCGCTGAC CATGGGCTTC
ATTCCGGGCG TCGCGGCGAT CCTGATCGGC CTGTTCAACT CGATCATGTT CCCGACGATC
TTCACCATCA CCCTGGAACG CTCGTCAGCC CCGGCCTCGG CGACTTCAGG TCTGATGTGC
ATGGCGATCT GCGGCGGCGG GTTCATCTCG ATCCTGTACG GCTTCACGGT CGACCAGTTC
GTGGCCCACT TCTCGGTCGG GGCCCGCTCG CTGGCCTTCA TCGTGCCGCT GGTCTGCTAT
CTGTACGTCC TGTGGTTCTC GTTCGCCGCC CGGCGCGCGC CGATCCATGA GATCCAGGAG
GATGCGGTGG CCGCCGGTCA CTAG
 
Protein sequence
MAGMGAAQAP NSGAGAKSGG GGLILAVVYV TALFFIWAFV TNLIDPLVKS MKVIYTLTDF 
ETQLNQFAFF IAYGVMSIPS AGYLAKNGYA KSIVLGLTGI VAGCLIAWST TFSHNFITVL
LGLFVAASGI TLLQVAANPL IASMGNPKGS HFRLNLSQAF NSMGAYLGGI FGAGFLLKGP
LFEKDVVITE AMKTTGLGFV TNVYLMIAVI LAFFTLAVFL VRNTITHHAP KMAEHSESPF
KALESKWANL GALGIFLYVG AEVCVISGMI FFLEQKQILN VPSQVAGFVG PIFMLFAMFG
RFGGSVLLRY VKATTMLAVV AACATGLCAL VIATYQMPAT PLGGTVHLPG DFVAPLTMGF
IPGVAAILIG LFNSIMFPTI FTITLERSSA PASATSGLMC MAICGGGFIS ILYGFTVDQF
VAHFSVGARS LAFIVPLVCY LYVLWFSFAA RRAPIHEIQE DAVAAGH