Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_1315 |
Symbol | |
ID | 5898770 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 1389485 |
End bp | 1392382 |
Gene Length | 2898 bp |
Protein Length | 965 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641561800 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_001682943 |
Protein GI | 167645280 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.689219 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCAAGGGT TGATGCAACA CGGGGCCTTG ACGGTCGACA AGATCATCGA CCATGCGGCC CAGTGGCACG GCGGCCGCGA AGTCGTCACC CGCTCGGTCG AAGGCCCGAT CGTCCGCACC ACCTATGGCG CGATCCGCGA CCGCGCCAAG CGAGTGTCAA ACCTCCTGCT GGCCTTGGGG ATCAAGCCGG GCGACCGGGT GGGAACCCTG GCCTGGAACA CCGCCCGCCA CATGGAGGCC TGGTACGGGA TCATGGGCAT GGGGGCGGTG TGCCACACCC TGAACCCCCG CCTGTTCCCC GAGCAGATCG CCTGGATCGC CAACCACGCT GGCGACCGCG TGATCTTCAC CGACCTGACC TTCCTGCCGA TCGTCGCCGG GATCCTGCAC CACCTGCCCG CCGTCGAGCA CGTGGTGCTG TTCACCGACC GCGGCCACAT GCCCGCCGGC TTCACGCCGG CCGGCGAGGC GCCGAACTTC AAGGGCTTGC TTTGCTACGA GGACCTGGTC GAGCAGCACC CCGCCGACTG CGCCTGGGGC GGCTTCGACG AGGGTACGGC GGCTGGACTC TGCTACACCT CGGGCACGAC GGGCGACCCC AAGGGCGTGC TCTATTCGCA CCGCTCCAAC GTGCTGCACA CCCTGATCAC CCTGCAGCCG GACGTGATGG GCCTGTCGCA GCGCGACGTG ATCTTGCCGG TGGTGCCGAT GTTCCACGCC AACGCCTGGG GCGTGGCGTT CTCGGCGCCC GGTACCGGCG CCAAGATGGT CATGCCCGGT GGCAAGATGG ACGGGGCGTC GATCTATGAG TTGCTCGATA GCGAAGGCGT CACCTTCTCG GCCGCCGTGC CCACCGTCTG GCAGATGCTG CTGCAGTATC TGAAGGAAAG CGGCGCCAAG CTGCCGGTGC TGAAGAAGGT GGTGATCGGC GGGGCGGCCT GTCCTGAGGT CATCATCCGC GCCTTCCAGG AGGATTACGA CGTCGAGGTG GTCCACGCCT GGGGCATGAC CGAGACCTCG CCGGTCGGCG CCCTGTCGGT GATGACCGAC GAACTGGCCA AGCTGCCCTA TGACCAGCAG ATGCCCTATC GGCTCAAGCA GGGCCGGCCG CCGTTCGGTG TCGAGCTGAA GTTGACCAAC GACTTGGGCG AGCGCCTGCC GCACGACGGC AAGAGCTTTG GCAACCTGAA GATCCGCGGT CCGATCATCG TCGCCGAATA CTTCCGCGGC GCTGGCGGCA AGATCCTCGA CGACGAGGGC TTCTTCGACA CCGGCGACGT GGCCACGATC GACGAGCACG GCTTCATGCA GATCACCGAC CGGGCCAAGG ACGTGGTCAA GTCGGGCGGC GAGTGGATCA GCACGATCGA CATCGAGAAC ATCGCCCTGG GTCATCCCAA GGCGGCGATG ACGGCGGTGA TCGGCGTGCC TCATCCCAAA TGGGACGAGC GACCGATCCT GCTGGTCAAG CTGAACGACG GCGAGACCGC CACCAAGGAA GAGTTCCTGG AGTTCCTGCG GGGCAAGATC GCCAAGTGGT GGATGCCCGA CGACGTGATC TTCGTCGACG AGATCCCATT GGGCGCGACG GGCAAGGTCG ACAAGAAGCT GATCCGCCAG CGGATGCAGG GCTATGTGCT GCCGGGTCTG GCCGCCGAGG CGGTCGCCGA GGTCGCGACC GAGGCCCAGT CCGAAGGCGA GTCCGCGGTC CAGTCCGAGC CGCCGGCCCC GACCCTGGCC GCCGCCGACG GCGCCCAGGC GGCGCGCATC TACGCGCCCG AGCCGGAGGA CCCGCTGTCG GAACCGCCGC CGCTGCTCGA CCCCCAGGTC GTCGAGGCCT TGGCCGAGGC GGAAGCCGAA TCCGAGGCCG CGCCGGAACC GGAGGCCGAA CCGCTGGTCG CGACCGCCGC CCCCGGGGCC GAGCCGGTCT TCGAGTCCCG CGCCACGGAG GAGCATTTCC CGCTTGGCCC GCTTCCCCCG GCGACGGAGG CCGAGCTGGC GCCGGTTCCC GAGGAGGCCT TCCACGCCAA GCCGGTCTTC GTCGCCGAGG AGGCGCCCCT GGTCATGCCG TTGGTTCCGC CGAGGGCGCG CCGCAAGGGC GGAAAGTCCA AGGTCGGCGG CAAGCCCGGC GGCCTGACGG CGGGCTTGCT TGACCTGGCG ATCCTGGTCG CCCTGGCGCC CGCCCTGCTG GTCGCGGCCG GCGCGCTGGG CGTGAAGTTC GGCCTGTTCC CGCTGGCGGT CGGTTATGAC CAGATGACCC TGGACTGGGC GCCCAAGGCG GCGCTGGCCA GCGCCGCCAC CGGGGTCCTG GGCCTGATCG CGGCCCTGTT CGGCGGCTTC TCGCGATACT GGGCCAAGGC CCTGCTGGCC CTGGCGATCA CCGTCGTCAC GATCGGCGCC ATGGTGGCGG CCAACGCCCT GGGCGGCCGC GCGCCGCCGA TCCACGACGT CTCGACCGAC TGGAAGACGC CGCTGATGCT GTCGGACGCC GGCCTGGCGG CGCGCGGCGA CCAGGCCCAG ACCGTCGAGG AGGATCCCAG CCTGCCGGTC GGCTCGCTGG CCTTCGCCGG CCGGCGGATC GCCGACGTCA ACGCCGAGAC CTGTCCGGCC GCCCGGCCGC TGGTGCTGGC GCGCTCGCCG GCCGACGCCT ACGAGTCGGC CAAGGCCGCC GTTCAGGCCG CCGGTCTGTC GATCGTCACC GACGACCCGA TGGACGGCCG GCTGGAGGCC ACGGGCCAGA GCTTCTGGTA CGGGCTGAAG GACGACCTGA TCGTGCGGGT GCGCCCCGAC ACGGCCGGCG CCCGGGTCGA CATGCGCTCG GTCGGCCGCA CCGCCGGCGC CGACATGGGC CGCAACTGCC GCCGGGTGGG CGGGCTGCTG GCGGTGGTGA AGGGGTAG
|
Protein sequence | MQGLMQHGAL TVDKIIDHAA QWHGGREVVT RSVEGPIVRT TYGAIRDRAK RVSNLLLALG IKPGDRVGTL AWNTARHMEA WYGIMGMGAV CHTLNPRLFP EQIAWIANHA GDRVIFTDLT FLPIVAGILH HLPAVEHVVL FTDRGHMPAG FTPAGEAPNF KGLLCYEDLV EQHPADCAWG GFDEGTAAGL CYTSGTTGDP KGVLYSHRSN VLHTLITLQP DVMGLSQRDV ILPVVPMFHA NAWGVAFSAP GTGAKMVMPG GKMDGASIYE LLDSEGVTFS AAVPTVWQML LQYLKESGAK LPVLKKVVIG GAACPEVIIR AFQEDYDVEV VHAWGMTETS PVGALSVMTD ELAKLPYDQQ MPYRLKQGRP PFGVELKLTN DLGERLPHDG KSFGNLKIRG PIIVAEYFRG AGGKILDDEG FFDTGDVATI DEHGFMQITD RAKDVVKSGG EWISTIDIEN IALGHPKAAM TAVIGVPHPK WDERPILLVK LNDGETATKE EFLEFLRGKI AKWWMPDDVI FVDEIPLGAT GKVDKKLIRQ RMQGYVLPGL AAEAVAEVAT EAQSEGESAV QSEPPAPTLA AADGAQAARI YAPEPEDPLS EPPPLLDPQV VEALAEAEAE SEAAPEPEAE PLVATAAPGA EPVFESRATE EHFPLGPLPP ATEAELAPVP EEAFHAKPVF VAEEAPLVMP LVPPRARRKG GKSKVGGKPG GLTAGLLDLA ILVALAPALL VAAGALGVKF GLFPLAVGYD QMTLDWAPKA ALASAATGVL GLIAALFGGF SRYWAKALLA LAITVVTIGA MVAANALGGR APPIHDVSTD WKTPLMLSDA GLAARGDQAQ TVEEDPSLPV GSLAFAGRRI ADVNAETCPA ARPLVLARSP ADAYESAKAA VQAAGLSIVT DDPMDGRLEA TGQSFWYGLK DDLIVRVRPD TAGARVDMRS VGRTAGADMG RNCRRVGGLL AVVKG
|
| |