Gene Caul_0962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0962 
Symbol 
ID5898417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp1011964 
End bp1013211 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content68% 
IMG OID641561444 
Productmajor facilitator transporter 
Protein accessionYP_001682590 
Protein GI167644927 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0738] Fucose permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.419565 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTCC CCGCCCGCCA GAACACCCGG CTCTTGAAGC TCCTGACCTA TCTGATGTTC 
GCGATGTTCG CGATGACGAC GGATTCGGTC GGGGTGATCA TCCCGCAGGT GATCAAGCAG
TTTTCCCTCG GCATGACCGT CGGGGGCGCC TTCCAGTACG CCACGATGTC GGGGATCTCC
ATCTCGGCGC TGGCGCTGGG TTTCCTGGCC GATCGGTTCG GCCGCAAGTG GACGATCATC
GCGGGGCTGG TGCTGTTCGG CGCGTCTTCA GCCCTGTTCG CCGCTGGCCA CGACTTCCTG
TTCTTCGTGG GGCTGCTGTT CATTTCGGGC GTCGGCATCG GCGTGTTCAA GGCCGGCGCC
CTGGCGCTGA TCGGCGACAT CTCCGGCTCG ACCCGCGAAC ATGCCGCCAC GATGAACACG
GTCGAAGGCT TTTTCGGCGT CGGCGCGATC ATCGGCCCGG CGATCGTCGC CAAGCTTCTC
GCGTCGGGAG CCGAATGGAA ATGGCTCTAT GTCATCGCCG CGGTGCTTTG CGGGGTCCTG
GTGCTGGCCG CCTCGGCGGC CAAGTATCCC AAGCCGCCCG TCCGCAAGGC CGAGCAGGAG
CCGCGCCTGC GCCAGACGCT GGGCTTGCTG CGCGATCCCT TCGCCCTGGC GTTCGGCCTG
GCGCTGATGC TCTACGTGGC GGCCGAGGCG GCGGTCTATG TCTGGGCCCC GACCTATCTG
AGCGGCTATA CGGGCAGCGC GGCCTGGTTC GCGCTCTACG TCGTCTCGAT CTTCTTCGTC
CTGCGCGCGG CCGGGCGGTT CCTGGGCGCC TGGCTCCTGT CCCGCTTCCG CTGGTCGGTG
GTGGTGGCCC TGAGCACGGG CGGGGTGCTG GTCTGCTTCC TGGCCAGCGC GATCGGCCAC
CGCGGGGTCG GCGCGATCGC CCTGCCGCTG TCAGGACTGT TCATGTCGGT GCTCTACCCG
ACGATCAATT CCAAGGGCAT CAGCTGCTTC GCCAAGTCAC AGCACGGCGC CATCGCCGGC
CTGCTGCTGT TCTTCACCTG CGCCAGCGCC GTGCTCGCCC CCTTGGCGAT GGGCGCGCTC
AGCGACGCCA TGGGCGACGC CAAATACAGT CTCTACCTGG CTACCGCCTT CGCCGCCGCC
CTGGCCGTGC TGGCGGTGGT CAACGCGGCC CTCGAACCCA CGCGGGCGCG GCTGGCCGAG
CGTGACAGCG AAGACTATCT GCCAGCCGAG GCGCTCACCG AGCGGTGA
 
Protein sequence
MTVPARQNTR LLKLLTYLMF AMFAMTTDSV GVIIPQVIKQ FSLGMTVGGA FQYATMSGIS 
ISALALGFLA DRFGRKWTII AGLVLFGASS ALFAAGHDFL FFVGLLFISG VGIGVFKAGA
LALIGDISGS TREHAATMNT VEGFFGVGAI IGPAIVAKLL ASGAEWKWLY VIAAVLCGVL
VLAASAAKYP KPPVRKAEQE PRLRQTLGLL RDPFALAFGL ALMLYVAAEA AVYVWAPTYL
SGYTGSAAWF ALYVVSIFFV LRAAGRFLGA WLLSRFRWSV VVALSTGGVL VCFLASAIGH
RGVGAIALPL SGLFMSVLYP TINSKGISCF AKSQHGAIAG LLLFFTCASA VLAPLAMGAL
SDAMGDAKYS LYLATAFAAA LAVLAVVNAA LEPTRARLAE RDSEDYLPAE ALTER