Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0958 |
Symbol | |
ID | 5898413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | - |
Start bp | 1007068 |
End bp | 1008780 |
Gene Length | 1713 bp |
Protein Length | 570 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641561440 |
Product | SSS family solute/sodium (Na+) symporter |
Protein accession | YP_001682586 |
Protein GI | 167644923 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.483778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCTT GGCGAACGCT GCCGTGGCTG ATCGGCCTGG CGAGCCTGAC CTTCGCCGGC GTTGCGGCAG CCACGGGCTT CGACGGCCAA GCCCAACGCC AGCCGCTCAA CTGGACGGCC ATCGCCATCT TCGCGGGGTT CGTGGCGCTC ACCCTTTGGA TCACCCGCTG GGCCGCGAGC CGGACAAAGA CCGTGTCCGA TTTCTATACC GCCGGCGGCA AGGTCACGGG CTTTCAGAAC GGATTGGCCA TCGCGGGCGA CTTCATGTCG GCCGCGTCGT TCCTGGGCAT TTCGGCCCAG ATCTTCACCG ACGGCTATGA CGGGCTGATC TATTCGATCG GGTTCCTGGT CGGCTGGCCC ATCCTGATGT TCCTGATGGC CGAAAAGCTG CGCAATCTTG GCCGCTTCAC GTTCGGCGAT GTGGCGTCCT ATCGCTTCGC CCAGGCCCCG GTGCGCAGCT TCGCCGCGTC CAGCACCCTG ATCGTGGTGA TCTTCTACCT GATCGCTCAG ATGGTCGGGG CCGGGCAGCT GATCCAGCTG CTGTTTGGCC TCCCCTATCG CTACGCCGTG GGCCTGGTGG GTCTGCTGAT GATCCTCTAT GTGCTGTTTG GCGGCATGAC CGCAACCACC TGGGTTCAGA TCACCAAGGC GGTGCTGCTG CTGGGCGGCG CCAGCTTCAT GGCCTTCATG GTCATGGCTT CCGTGCATTT CTCCCCCAAC GCCCTCTTCG CCCAGGCGAT CGACGTGAAG ACCCTACTGG CCGCCAAGGC GGGCGCCGAC CCGCGAGAGG CGGCGCGGTT GGGCGGCGCC ATCATGGGGC CGGGGGGCTT TCTGAAGGAC CCCATCTCGG CCATTTCCTT CGGCATGGCG CTGATGTTCG GCACCGCGGG CCTGCCGCAT ATCCTGATGC GCTTCTTCAC GGTCGCGGAC GCGCGCGAAG CCCGCAAGTC CATCCTGTGG GCGACGACCT GGATCGGCTA TTTCTATGTC CTGACGTTCA TCATCGGCTT TGGCGCCATT GTCCTCGTCG CCAGCAACCC GGCGTTCCTC ACGCCCGAGG GCGGCTTGAG AGGGGGCGGC AACATGGCCG CGATCCACCT GGCTCAGGCG GTCGGCGGCA ACCTCTTCCT CGGCTTCATC TCCGCGGTGG CCTTCGCCAC CATTCTGGCC GTGGTGGCGG GCCTGGCGCT GTCGGGCGCC TCGGCCATCT CGCATGATCT CTACGCGACC GTCTTCAAGC ACGGCGCGGC CGCGTCTCGC GACGAACTGC GCGTGTCGCG GATCACGACG GTGATCCTTG GCCTGATCGC GGTCGTGATG GGCGTGATGT TCGAGAAGCA GAATGTGGCC TTCATGGTCT CGCTCGCCTT CGCCCTCGCG GCGTCGGGCA ACTTTCCCGT TCTTCTGCTC GGCCTGTTGT GGAAAGGCTG CACAACGCGG GGCGCGGTCA TCGGCGGGTT CATCGGCCTG ACCACCGCCC TGGTCCTGAT GATCCTGTCC CCGTCGATCT GGGTAAAGGC CCTGGGCCAT GAGACGGCGA TCTTCCCGTT CACCTCACCG GCGCTGTTCT CCATGACCGC CGGGTTCGTC GGCATATGGC TCTTCTCGGT CCTTGATCGC AGTCCCAGGT CGGTCGTGGA TCGCGACGGG TTCGAGGAGC AGCTGGTGCG GTCCGAAACG GGGATCGGCG TCAGCGCGGC CCTGGATCAC TAG
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Protein sequence | MTPWRTLPWL IGLASLTFAG VAAATGFDGQ AQRQPLNWTA IAIFAGFVAL TLWITRWAAS RTKTVSDFYT AGGKVTGFQN GLAIAGDFMS AASFLGISAQ IFTDGYDGLI YSIGFLVGWP ILMFLMAEKL RNLGRFTFGD VASYRFAQAP VRSFAASSTL IVVIFYLIAQ MVGAGQLIQL LFGLPYRYAV GLVGLLMILY VLFGGMTATT WVQITKAVLL LGGASFMAFM VMASVHFSPN ALFAQAIDVK TLLAAKAGAD PREAARLGGA IMGPGGFLKD PISAISFGMA LMFGTAGLPH ILMRFFTVAD AREARKSILW ATTWIGYFYV LTFIIGFGAI VLVASNPAFL TPEGGLRGGG NMAAIHLAQA VGGNLFLGFI SAVAFATILA VVAGLALSGA SAISHDLYAT VFKHGAAASR DELRVSRITT VILGLIAVVM GVMFEKQNVA FMVSLAFALA ASGNFPVLLL GLLWKGCTTR GAVIGGFIGL TTALVLMILS PSIWVKALGH ETAIFPFTSP ALFSMTAGFV GIWLFSVLDR SPRSVVDRDG FEEQLVRSET GIGVSAALDH
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