Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Caul_0884 |
Symbol | |
ID | 5898339 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Caulobacter sp. K31 |
Kingdom | Bacteria |
Replicon accession | NC_010338 |
Strand | + |
Start bp | 938814 |
End bp | 939674 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641561367 |
Product | pirin domain-containing protein |
Protein accession | YP_001682513 |
Protein GI | 167644850 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.975363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.423189 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATGA CCCCTCGCAC CCTCAAACGC CTGCACCCCG CCCAGCGCGA CGACATAGGC GATCTGACCA CCCGGCGCCC GTTGCCCGGC CCGGCGATCG CGCAGCTGGA TCCGTTCCTG TTCCTCAACC ACCACGGCCC GCAGGTCTAT CCGGCGGGCA ATCGCGGCCT GCCGTTCGGG CCGCATCCGC ATCGCGGCTT CGAGACCGTG ACCTTCATCC TCGACGGCGA GCTGTCGCAT CTCGACAGCG GCGGCCACGA GAGCGTCATC GGCCCGGGCG GCGTGCAGTG GATGACGGCC GGCAGCGGCC TGGTCCACGC CGAACTGTCG CCGGCCGCCT TCAAGCAAGC GGGCGGGCCG CTGGAGATCC TGCAGCTGTG GGTCAACCTG CCCGGCCGGC TGAAGATGAC CACGCCGAAC TATCTGGGCC TGCAGGGCGC CGAGATCCCC AAGGTCGAGA GGGGGGGCGT GACGATCGAG GTGGTCTCAG GCGAGGTCGC CGGCGTGACC GGCCCGTTCC CGTCGCTGAT CGGCGTCGCG ATGAGCGTCG TGCGCCTGGC CGCGGGCGGC GCGCTGGACC TGCCGGTGGC CCAGGGGCGG ACGGTGTTTC TGTACGTGGT GTCCGGCGAG ATCGTCGTGG GCGGGCAGGT CGCGCCGCGC TGGACCCTGG TCGAGCTGAA CGACGACGGC GACGCGGTGG CCTTCGACAC CCCATCCGGC GCGGTGGTCC TGCTGGGCCA CGCCGAGCCG ATCGGCGAAC CGGTCTTCGC CCACGGGCCG TTCGTGATGA ACACCCGCGA GGAGATCGTC CAGGCGATCG ACGACTACAA TGCGGGGAAG TTCGGGAACG TGCCGGGCTG A
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Protein sequence | MTMTPRTLKR LHPAQRDDIG DLTTRRPLPG PAIAQLDPFL FLNHHGPQVY PAGNRGLPFG PHPHRGFETV TFILDGELSH LDSGGHESVI GPGGVQWMTA GSGLVHAELS PAAFKQAGGP LEILQLWVNL PGRLKMTTPN YLGLQGAEIP KVERGGVTIE VVSGEVAGVT GPFPSLIGVA MSVVRLAAGG ALDLPVAQGR TVFLYVVSGE IVVGGQVAPR WTLVELNDDG DAVAFDTPSG AVVLLGHAEP IGEPVFAHGP FVMNTREEIV QAIDDYNAGK FGNVPG
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