Gene Caul_0621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCaul_0621 
Symbol 
ID5898076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCaulobacter sp. K31 
KingdomBacteria 
Replicon accessionNC_010338 
Strand
Start bp686521 
End bp687159 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content69% 
IMG OID641561103 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_001682252 
Protein GI167644589 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.881689 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCG CCCCGCCCAG TTCGGAGATT CGCGTCCTGG TCGTCGATGA CCATCCGATG 
CTGCGCGAAG GCGTGGCGGC GGTGCTGGCG CTGCAGCCCG ACATGACGCT GATCGGCGAG
GCCGAGAACG GCGCCGAGGC CATCGCGCGT TTCCGGGAGC TGCGGCCGGA CGTGACGCTG
ATGGACCTGC AAATGCCGGG GACGAACGGG CTCGAGGCCA TCCAGGCCAT CCGCGCCGAA
TTCCCCAACG CCAAGATCGT GGTGCTGACC ACCTATGCCG GCGACGCCCA GGCCCTGCGC
GCCCTGAAGG CCGGAGCCAC CGGCTACCTG CTCAAGAGCA CCCTCCGCCG TGAGCTGCTC
GACACCATCC GCAATGTCCA CGCCGGCCGC CGCCACCTGC AGTCCGAGGT CGCCCACGAG
ATCGCGATCC ACGCCATCGA CGAGGCGCTC AGTGAACGCG AGGCCCACGT GTTGCGCCTG
GTGGCGGCCG GGCGGGCCAA CAAGCAGATC GCCTGGGAGC TGTCGCTGTC GGAAGACACC
GTCAAGGCGC ACCTGAAGAG CATCTTCGCC AAGCTGGATG TGGCCGATCG CACCCACGCC
GTCACCATCG CGGCGCGGCG CGGCATCATC GAGATCTGA
 
Protein sequence
MTAAPPSSEI RVLVVDDHPM LREGVAAVLA LQPDMTLIGE AENGAEAIAR FRELRPDVTL 
MDLQMPGTNG LEAIQAIRAE FPNAKIVVLT TYAGDAQALR ALKAGATGYL LKSTLRRELL
DTIRNVHAGR RHLQSEVAHE IAIHAIDEAL SEREAHVLRL VAAGRANKQI AWELSLSEDT
VKAHLKSIFA KLDVADRTHA VTIAARRGII EI